LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g04131	ATGATGCTTTGTTGTACCGGCAAGATTTCCTCGAAGGAAGACATGGCAGGAGACTCATACGATGACGCCATTGCAGCCCTCTCCGACCTCCTCAAGGACAAAGCCGAACTCGGCAGCCTGGCCGCCGCAAAGATCAAGCAGCTCACGGCGGACCTGGAGGCCGCCGGTTCCACTCCATTCAACCCGGATGACAGGATCCGAACCGGCTTTGACCACTTCAAGAAGGAGAAATTCGAAAAGAATCCGGATTTGTTTGGCGAACTCGCTAAAGGACAGAGCCCAAAGTTTATGGTTTTTGCTTGCTCAGATTCAAGAGTTTGCCCATCTCATGTTCTGGATTTCCAACCTGGTGAAGCTTTTGTGGTCCGAAACATTGCCAACATGGTTCCACCATATGAAAAGACGAAGTACGCAGGAACAGGGGCAGCCATTGAATATGCGGTCTTACATTTAAAGGTGGAGAATATTGTGGTAATTGGACATAGCTGCTGTGGAGGTATAAAGGGACTCATGTCTATCCCTGATGATGGGACCACTGCAAGTGACTTCATAGAGCAATGGGTCCAAATTTGTAATCCAGCAAGATCCAAGGTTAAAGGAGGAGCTGGTGACTCAAGCTTTTCAGATCAATGTGCCAGTTGTGAAAAGGCAACTGTGAATGTATCACTTGGGAACCTATTAACTTATCCATTTGTGAGAGAAGCAGTAGTGAGTAAAAAGCTTGCATTGAAGGGTGCACATTATGATTTTGTTAAAGGCAGCTTTGAGTTGTGGGATTTGGACTTCAAAGTCACTCCCCCTGTGTCCCTGCTTTAA	816	0.4706	MMLCCTGKISSKEDMAGDSYDDAIAALSDLLKDKAELGSLAAAKIKQLTADLEAAGSTPFNPDDRIRTGFDHFKKEKFEKNPDLFGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYEKTKYAGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPARSKVKGGAGDSSFSDQCASCEKATVNVSLGNLLTYPFVREAVVSKKLALKGAHYDFVKGSFELWDLDFKVTPPVSLL	271

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g04131	271	Pfam	Carbonic anhydrase	97	254	IPR001765	GO:0004089\|GO:0008270
	Aip03g04131	271	Gene3D	Carbonic anhydrase	55	270	IPR036874	GO:0004089\|GO:0008270
	Aip03g04131	271	CDD	beta_CA_cladeB	69	258	IPR045066	GO:0004089\|GO:0008270
	Aip03g04131	271	SMART	Pro_CA_2	89	259	IPR001765	GO:0004089\|GO:0008270
	Aip03g04131	271	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	101	108	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Aip03g04131	271	PANTHER	CARBONIC ANHYDRASE	15	270	-	-
	Aip03g04131	271	PANTHER	CARBONIC ANHYDRASE	15	270	IPR001765	GO:0004089\|GO:0008270
	Aip03g04131	271	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	145	165	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Aip03g04131	271	SUPERFAMILY	beta-carbonic anhydrase, cab	55	266	IPR036874	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g04131	Aip-Chr3	125100562	125109248	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g04131	K01673		-	gmx:100810496	459.144

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g04131	03	125100562	125109248	Aip03g04131	03	125100562	125109248	ECH