Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04126 ATGCCATGGCTTGCTATTCCCTTCTCGGATTCCGAGACCATTAGTAGCCTCAAGAAGCTGTTTCAAGTGAGGGGGATTCCCAGTCTTGTTCTGCTTGATGAAGCTGGTAAACTTGTCACTAAAACTGGGGTTATGCTTATCAATGAACATGGGGCTGAAGCATACCCTTTTACGTCACAAAGGATCCATGAGCTCAAGGATCAAGAACAGGAAGCCAGGAGGAACCAGACCTTAACATCAATTTTGGTCTCTCGCTCTCGTGATTTTCTCATATCTTCTGATGGGAAAAAAGTACTTGTATCTGAGCTTGAGGGCAAGATAGTTGGTCTGTATTTCTACTCTGTTGTATACAATGCATCGGCAAATTTTACTCCAAAGCTATTGGAGGTATACAAGAAGCTGAGGGAAAAGGGTGAGAAGTTTGAGGTTGTGGGAATACCCTTAGATAGTGATGAAGAATCATTCAAGAAAGGACTTGAAAGTGTGGCTTGGCTATCCTTGCCTTTCAATGACAAGAGCATTGATAAGTTGGCAAGGTACTTTGAGCTCTCAGCTCTCCCAACTTTGGTTATTATTGGAGAAGATGGCAAAACTCTTCATTCCAATGTTGCTGAGGTTGTTGAGGAGCATGGTATTGCTGCATACCCTTTCACTCCTGACAAGTTTGCTGAGCTCAGTGAGATCGACAAGGCCAAGGAGGCGTCTCAAACACTCGAGTCAATTTTGGTGTCTGGAGAACAAGATTTTGTCATAGCAAAAGATGGGGTGAAGGTTCCGGTTTCAGAGCTAGTAGGAAAGACCATCCTCTTATACTTCTCAGCCCATTGGTGTCCTCCATGCCGCGCATTCCTTCCAAAACTCATTGATGCATACCAGAAGATTAAGGAAAAGGACAATAGTGCATTAGAGGTAATTTTCATCTCAAGTGACCGGGACCAAGACTCCTTTGAGGCATTCTTTGGAGGAATGCCATGGTTGGCGCTTCCCTTTGGAGACTCAAGAAAGGCTTTCTTGAGCCGCAAGTTTAAGGTATCCGGCATCCCAAAGCTTGTGGCCATTGGATCAAGCGGCAGGACCGTCACAAAAGAGGCCAGGGATCTCGTTGACCTTCACGGCGCAGATGCTTATCCTTTCACTGAGGAGAGGATTAAGGAGTTAGAGACAGCAGAGGAAGAGATTGCAAAAGGGTGGCCTCAGAAGTTGAAGCATGAATCACATGAGCATGAGCTTGTGCTCACGCGCCGCAGGATATATAACTGCGATGGTTGTGATGGCCAGGGCCGTGTTTGGTCCTTCTATTGTGCCGAATGCGACTTTGATCTGCATCCAAAGTGTGCATTGGAGAACAAAGAAAGCAAACATGATGAGGCCAACGATGAAGACAAGTCTAAACATGGTTGGGTTTGTGATGGACAAGTTTGCACTAAAGCTTGA 1434 0.4554 MPWLAIPFSDSETISSLKKLFQVRGIPSLVLLDEAGKLVTKTGVMLINEHGAEAYPFTSQRIHELKDQEQEARRNQTLTSILVSRSRDFLISSDGKKVLVSELEGKIVGLYFYSVVYNASANFTPKLLEVYKKLREKGEKFEVVGIPLDSDEESFKKGLESVAWLSLPFNDKSIDKLARYFELSALPTLVIIGEDGKTLHSNVAEVVEEHGIAAYPFTPDKFAELSEIDKAKEASQTLESILVSGEQDFVIAKDGVKVPVSELVGKTILLYFSAHWCPPCRAFLPKLIDAYQKIKEKDNSALEVIFISSDRDQDSFEAFFGGMPWLALPFGDSRKAFLSRKFKVSGIPKLVAIGSSGRTVTKEARDLVDLHGADAYPFTEERIKELETAEEEIAKGWPQKLKHESHEHELVLTRRRIYNCDGCDGQGRVWSFYCAECDFDLHPKCALENKESKHDEANDEDKSKHGWVCDGQVCTKA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04126 477 ProSitePatterns Thioredoxin family active site. 269 287 IPR017937 -
Aip03g04126 477 ProSiteProfiles Thioredoxin domain profile. 225 388 IPR013766 -
Aip03g04126 477 SUPERFAMILY Thioredoxin-like 90 201 IPR036249 -
Aip03g04126 477 Pfam Thioredoxin-like 105 197 IPR012336 -
Aip03g04126 477 Pfam Thioredoxin-like 265 358 IPR012336 -
Aip03g04126 477 SUPERFAMILY Cysteine-rich domain 397 449 IPR046349 -
Aip03g04126 477 Pfam C1 domain 405 446 IPR004146 -
Aip03g04126 477 SUPERFAMILY Thioredoxin-like 252 361 IPR036249 -
Aip03g04126 477 CDD TryX_like_TryX_NRX 248 378 IPR045870 GO:0004791
Aip03g04126 477 PANTHER NUCLEOREDOXIN 1-2-RELATED 1 447 - -
Aip03g04126 477 PANTHER THIOREDOXIN 1 447 - -
Aip03g04126 477 Gene3D Glutaredoxin 241 379 - -
Aip03g04126 477 Gene3D Glutaredoxin 81 218 - -
Aip03g04126 477 Gene3D Glutaredoxin 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04126 Aip-Chr3 125035820 125038119 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04126 K17609 - gmx:100809224 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04126 03 125035820 125038119 Aip03g04126 03 125035820 125038119 ECH