Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04125 ATGGCAGATTCTGAAGATGATGCCCCCGACGAATTCCAAGACCTCTTCTCTTCTCCTGACAGGGACTTTTTAATCAACAACAATGGCGATCAGGTTAAAGTAGAGACCTTGAAGCAAAAGAAACTCGGTTTGTATTTTTCAGCATCGTGGTGTCCTCCATGCCAAAGATTCACCCCAGCTTTGGTGGAGGTGTACAATGAACTCGCCCCCAAAGGTGACTTCGAAGTAGTGTTTATCTCTGCTGATGAAGATGATGCCACTTTTATGGAGTACTTCTCTCAGATGCCATGGCTTGCTATTCCGTTTTCCGATTCGGAGGCACGCAACCGCCTTGATGAACTATTCGAGGTGGAAGGGATTCCTAATCTTGTGTTACTTGATGAAACTGGAGAGGTTGTTACTGATAGCGGAGTTGATGTTATTCGTGAATATGGAGTTGAAGGCTACCCTTTTACATTAGCAAAGATTCAAGAATTGAAGGATCTTGAAGAGGAAGCTAAGAGGAACCAATCCTTGAAATCTCTCTTGCTATCTCCTTCTCGTGACTTTGTCATTTCTTCCCATGGGAATCAAATAGCTGTTTCTGAACTCGAGGGCAAGATGGTTGGCCTTTATTTCTCATCGAGTTCATACGAAAGATGCACTGAATTTACTTCCCGCCTTGTGGAGTTTTATGACAAGTTAAAGACAGATGGGGAGAGCTTTGAGATTGTGATGATACCTCTTGATGAGGATGAAGAATCCTTTAAGAAAGGATTGGAAAGTATGCCTTGGTTGTCATTGCCTTTTGAGGACAAGAACTGTGGAAAGTTGATAAGATACTTTGAGGTCTTAACTCTCCCCCGTTTGGTAATTATTGATGAAAATGGGAAAACTCTTCATTCTAATGTTGTTGAGGCTGTTGAGGAACACGGAGCTATTGCATACCCTTTCTCCCCTGAAAAGTTTGCTGAGCTAAGTGAGATCGAGAAGGCCAAGGCTGCATCACAAACCCTCGAGTCCTTGTTGGTCTCTGGAGATCAAGATTTTCTCATTCGAAAAGATGGTACCAAGGTTCTAGTGTCAGAATTAGTGGGAAAGAACATCCTCCTCTACTTTTCAGGAGGGTGGTGTGCTGCATGCCATGTATTCCATCCAAAACTAATAGAAGCATATCATGAGATTAAGGAAAAGGAGGAGGAATTCGAAGTGATTTTCATCTCAAGCGACCACGACCAAGCATCATTTGAAGAATCCTTTGCAGTGATGCCATGGCTGGCTATCCCTTATGGGGATCCAAGGAAGTCATACCTCACCCGGAAGTTCAGGGTGTATGAAGTCCCCATGCTTGTTGCAATTGGAGCAAACGGGCAAACCATCACAAAAGACGCGAGATTTCTGATAAACTATCATGGGGCACGGACTTATCCTTTCACGGAGGAGAGGATCAAAGAGGTTCAGGAAGAAGAGGATGAGGCTGCAAAGGGGTGGCCGGAGAAGCTGGACCATGAGAAACACAAGCATGAGATTTCATTGACCGTCCATCTGAGCTTCCTCCTTGGATTATACCCTGTTTTTATGATGGGTGAGTCAGAGGTGAAAAAATTCAGCCTAAACATCAACAAGAATGGAAAAAGTGCGTTCCCTAAGGCACTGGATCCTGCAATATCTACTTTTTTTGTTCAGATCCCCAACAAGCTTCAGAATGTTCTTAAGTCACAGCTGAGTAGATTAGCAAAGAGGGATGGAATGAACTCGACGAGATCTGTCCAGAATAATGGGTACAAGTCTTTTAGTGCCTCTGAAGCTGAACTGAATGAGCAACTGCAATTGTGGAGAGAAAACCCTTCTTGGGTTGATAGGGCACCTGAGATAAAGGTGACTGTTCCAAAAGGCTCTCTTTGCAACCTCAACGTAGAAGTTGATGTTGGTTTGCCACCTGATGCAGTGTATAATATAGTAACAGATCCTGATAATAGGAGAGTTTTCAAAAATATCAAAGAAGTGATATCCAGAGAAGTTTTAGTTGATGAGGGTCATAGGCAAGTGGTTCAACTAGAACAAGCAGCCATATGGAGATTTCTGTGGTGGTCCGGGACCATTGCGATTAATGTCTTGGTAGATCAAAACAGAAATGACCACTCTATGAAGTTCAAGCAAATCAAAACAGGATTCATGAAAAAATTTGAGGGCTGTTGGAGAGTAGAGCCATTACTTGTTGATGAAGGAATATGTTTTCCATTTAAACCACTGACAAAAGAAGACTACAAATCATGCACAAGAGGCAAAGGAAGAGTAGGGTCTAAAGTGACCCTGCAACAAATACTTCAACCAGCCATTGTTCCTCCACCTCCTATATCATGGTATCTGAGGGGAATCACAACCCGGACGACTGAGATGCTTATACATGATCTTCTTGCGGAAGCTGCGAGAATTAGAGGAAATGAGGCCAAAAAGTCTAAGGGAAAACCTGGGAAAAGTTTAGACCTTGTTTCTGACACAAAAGACATTAAAGAAAGATGGATTTTACATAGAAAAAATGCAAAGCAAAACAATAGGAGGCTGCTGGCTGCTAAATGA 2559 0.4279 MADSEDDAPDEFQDLFSSPDRDFLINNNGDQVKVETLKQKKLGLYFSASWCPPCQRFTPALVEVYNELAPKGDFEVVFISADEDDATFMEYFSQMPWLAIPFSDSEARNRLDELFEVEGIPNLVLLDETGEVVTDSGVDVIREYGVEGYPFTLAKIQELKDLEEEAKRNQSLKSLLLSPSRDFVISSHGNQIAVSELEGKMVGLYFSSSSYERCTEFTSRLVEFYDKLKTDGESFEIVMIPLDEDEESFKKGLESMPWLSLPFEDKNCGKLIRYFEVLTLPRLVIIDENGKTLHSNVVEAVEEHGAIAYPFSPEKFAELSEIEKAKAASQTLESLLVSGDQDFLIRKDGTKVLVSELVGKNILLYFSGGWCAACHVFHPKLIEAYHEIKEKEEEFEVIFISSDHDQASFEESFAVMPWLAIPYGDPRKSYLTRKFRVYEVPMLVAIGANGQTITKDARFLINYHGARTYPFTEERIKEVQEEEDEAAKGWPEKLDHEKHKHEISLTVHLSFLLGLYPVFMMGESEVKKFSLNINKNGKSAFPKALDPAISTFFVQIPNKLQNVLKSQLSRLAKRDGMNSTRSVQNNGYKSFSASEAELNEQLQLWRENPSWVDRAPEIKVTVPKGSLCNLNVEVDVGLPPDAVYNIVTDPDNRRVFKNIKEVISREVLVDEGHRQVVQLEQAAIWRFLWWSGTIAINVLVDQNRNDHSMKFKQIKTGFMKKFEGCWRVEPLLVDEGICFPFKPLTKEDYKSCTRGKGRVGSKVTLQQILQPAIVPPPPISWYLRGITTRTTEMLIHDLLAEAARIRGNEAKKSKGKPGKSLDLVSDTKDIKERWILHRKNAKQNNRRLLAAK 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04125 852 SUPERFAMILY Thioredoxin-like 185 294 IPR036249 -
Aip03g04125 852 Gene3D - 629 738 IPR023393 -
Aip03g04125 852 ProSiteProfiles Thioredoxin domain profile. 12 161 IPR013766 -
Aip03g04125 852 SUPERFAMILY Bet v1-like 631 738 - -
Aip03g04125 852 Pfam Domain of unknown function DUF220 691 762 IPR003863 -
Aip03g04125 852 Pfam Thioredoxin-like 360 451 IPR012336 -
Aip03g04125 852 Pfam Thioredoxin-like 40 132 IPR012336 -
Aip03g04125 852 Pfam Thioredoxin-like 199 291 IPR012336 -
Aip03g04125 852 PANTHER THIOREDOXIN 4 511 - -
Aip03g04125 852 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 511 - -
Aip03g04125 852 CDD TryX_like_TryX_NRX 22 151 IPR045870 GO:0004791
Aip03g04125 852 SUPERFAMILY Thioredoxin-like 24 133 IPR036249 -
Aip03g04125 852 CDD SRPBCC 630 770 - -
Aip03g04125 852 SUPERFAMILY Thioredoxin-like 345 478 IPR036249 -
Aip03g04125 852 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Aip03g04125 852 ProSiteProfiles Thioredoxin domain profile. 321 481 IPR013766 -
Aip03g04125 852 Gene3D Glutaredoxin 15 152 - -
Aip03g04125 852 Gene3D Glutaredoxin 174 312 - -
Aip03g04125 852 Gene3D Glutaredoxin 335 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04125 Aip-Chr3 125021307 125027688 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04125 K17609 - gmx:100809224 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04125 03 125021307 125027688 Aip03g04125 03 125021307 125027688 ECH