Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04122 ATGGCAGAGAAGAAGAACCTGCTTGTACTTGACACCGTGACCAGGAGACTCACCTCCATAGCCAACCACCTTGGTGCCTCTTCTCAATCTGATCACCCTTCTCTTCATCCTCACAACCAACTCCAACTTGGCCTCTGTGACTCTTCAACTTCCCGGAATGATAGCTACGAACGTGTTCACGGTGATGTTCCCTCCCACGACGTCGTTTGGAGGGTCATCGCTTCCGATGCTGACTCCGACAAGGAGTACACTGACATCATCTACGAGAAGGCTGTTGGGGAAGGCATAGCCAAGATTAGTATTAATAGGCCTGAGAGAAGGAATGCCTTTCGACCCAATACAGTTAAGGAACTTATTCGTGCTTTCAATGATGCCAGGCATGATAGCTCTATTGGGGTTGTCATTCTTACTGGCAAGGGGACCAAGGCATTTTGTAGTGGTGGTGACCAAGCTTTGAGGACAGCAGATGGTTATTCTGATAATGAAGATATTGGTAGCCTTAATGTGTTGGACTTGCAGGTAGTGATTCGCCGCCTTCCAAAACCAGTAATCGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGACATATATTGCACATGGTCTGCGATCTAACTATTGCAGCCGATAATGCCATCTTTGGCCAAACTGGTCCTAAGGTGGGAAGCTTTGATGCTGGTTATGGAAGTTCCATCATGTCCAGATTGGTAGGTCCAAAAAAAGCACGTGAAATATGGTTTCTCACTAGATTCTATACAGCTGATGAAGCAGATAAAATGGGCCTTGTTAATACTGTTGTGCCACTTGAGAATCTAGAAAAAGAAACGATAAAATGGTGTCGGGAGATACTCAGGAACAGCCCAACTGCACTTCGAATTCTCAAGTCAGCGCTTAATGCAGTGGACGATGGGCATGCTGGACTTCAGGAAATGGCTGGAAATGCAACCCTGATATTTTATGGCACTGAAGAAGCTATTGAGGGAAGGACTGCATTTATGCAACGCAGACGCCCTGATTTTTCCAAGTTTCATCGGCGACCTTGA 1041 0.464 MAEKKNLLVLDTVTRRLTSIANHLGASSQSDHPSLHPHNQLQLGLCDSSTSRNDSYERVHGDVPSHDVVWRVIASDADSDKEYTDIIYEKAVGEGIAKISINRPERRNAFRPNTVKELIRAFNDARHDSSIGVVILTGKGTKAFCSGGDQALRTADGYSDNEDIGSLNVLDLQVVIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREIWFLTRFYTADEADKMGLVNTVVPLENLEKETIKWCREILRNSPTALRILKSALNAVDDGHAGLQEMAGNATLIFYGTEEAIEGRTAFMQRRRPDFSKFHRRP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04122 346 CDD crotonase-like 86 282 - -
Aip03g04122 346 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 184 204 IPR018376 GO:0003824
Aip03g04122 346 Pfam Enoyl-CoA hydratase/isomerase 94 340 IPR001753 GO:0003824
Aip03g04122 346 Gene3D - 74 283 - -
Aip03g04122 346 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 70 345 IPR010198 GO:0008935|GO:0009234
Aip03g04122 346 TIGRFAM menB: naphthoate synthase 83 342 IPR010198 GO:0008935|GO:0009234
Aip03g04122 346 SUPERFAMILY ClpP/crotonase 81 341 IPR029045 -
Aip03g04122 346 MobiDBLite consensus disorder prediction 25 47 - -
Aip03g04122 346 Gene3D - 284 334 IPR014748 -
Aip03g04122 346 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 11 346 IPR010198 GO:0008935|GO:0009234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04122 Aip-Chr3 125008263 125011333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04122 10 346 Acyl Lipid Metabolism Gene Families AT1G60550 75.148 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04122 K01661 - gmx:100807101 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04122 03 125008263 125011333 Aip03g04122 03 125008263 125011333 ECH