Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04111 ATGGGCGAGGCCGAGCTTATCTGCCCACGTGCCGAGATTTTCGGGCGGTTGATATTATCTCGGCCTCGAATGTTTGCGTGCCGAGTATGCCGGGCGACCGAGGATACAGGTGACGTATCACGGAGGTTACGGCTTGGCGACAATGGCAACTTCGTCGATCAGCTTGGGTTGCAGCTCTCTCCGGTATGGGGAAACCTTTTCTCCTCACTCCCCTCCACACCACCACCGACGCCCCCTCACCCTTCTTCCACCCCCCAACGCGTCATTGCCTCCGACGGCGACCGCTCCGTCGTCGTCGGCGACTCCGGCGTATCCTACCTCCTCCCCGGAGCTCCCTTCGAGTTCCAATTCAGCTACTCCGAGACCCCGACGGAGAAGCCCATCGCCATCAGGGAGCCGGCGTTCCTGCCATTCGCCCCGCCCACGATGCCGCGGCCGTGGACGGGGAAGGCCCCGCTGAAGAGCAAGAAGGACAAGGAGAAGAAGGTGAGGCTGCTGGAGTCATTGAACCCGCCGCGTCCCGATACCAATGGGGTGAAGCAGTTGGAGATGGCGAAGCCATTGAAGCTTGGTAAATACTCCAGGGATGGGAAGACGAGGGAGGAGATACTCGGCGACCCCTTGAGGAAATGGGAGATAAGGATGCTTGTTAAGCCTATGGTCTCTGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTGATACATTCGCATTGGAAGCGTAGCCCTGTCTGTAAAATTCGTTGTAAAGGGGTTCCAACTGTAGATATGAAAAATGTCTGTCACCACATTGAGGATAAAACAGGGGGGAAAATAATTCTTAGAGTTGGTGGTGTTGTTTATCTTTTCCGTGGAAGAAACTACAACTATAGTACACGCCCACTGTATCCAGTGATGCTCTGGAAGCCTGCTGCACCTGTTTACCCAAAACTTATACAAGCTGCTCCAGGAGGATTAACAAAATCTGAAGCTGATGAACTACGTCTGAAAGGGAAAAGTCTTTTGCCAATATGTAAATTAGCCAAAAATGGAGTCTACACCTCGCTTGTAAAGGATGTCAGAGAGGCTTTTGAAGGAAGCCCTTTGGCGAAGATTGACTGCAAGGGACTGGAGCCTAGCGACTACAAGAAATTAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTTCTGCTGTCTTTTGATGATGAACAGATATTGATGTGGAGAGGCAAAGATTGGAAATCAATGTTCCCACAACCTCCTCCACTTTCTCGTCCTTCAGAAGCTGGCATTACAGGGAATTCGGACAGTACAGGTGTGTAA 1323 0.5163 MGEAELICPRAEIFGRLILSRPRMFACRVCRATEDTGDVSRRLRLGDNGNFVDQLGLQLSPVWGNLFSSLPSTPPPTPPHPSSTPQRVIASDGDRSVVVGDSGVSYLLPGAPFEFQFSYSETPTEKPIAIREPAFLPFAPPTMPRPWTGKAPLKSKKDKEKKVRLLESLNPPRPDTNGVKQLEMAKPLKLGKYSRDGKTREEILGDPLRKWEIRMLVKPMVSDNRQVNLGRDGLTHNMLELIHSHWKRSPVCKIRCKGVPTVDMKNVCHHIEDKTGGKIILRVGGVVYLFRGRNYNYSTRPLYPVMLWKPAAPVYPKLIQAAPGGLTKSEADELRLKGKSLLPICKLAKNGVYTSLVKDVREAFEGSPLAKIDCKGLEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSMFPQPPPLSRPSEAGITGNSDSTGV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04111 440 SUPERFAMILY YhbY-like 207 300 IPR035920 -
Aip03g04111 440 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 86 438 IPR044599 GO:0000373
Aip03g04111 440 MobiDBLite consensus disorder prediction 417 440 - -
Aip03g04111 440 SMART CRS1_YhbY_2 326 409 IPR001890 GO:0003723
Aip03g04111 440 SMART CRS1_YhbY_2 208 291 IPR001890 GO:0003723
Aip03g04111 440 Pfam CRS1 / YhbY (CRM) domain 326 409 IPR001890 GO:0003723
Aip03g04111 440 Pfam CRS1 / YhbY (CRM) domain 211 291 IPR001890 GO:0003723
Aip03g04111 440 ProSiteProfiles CRM domain profile. 324 420 IPR001890 GO:0003723
Aip03g04111 440 Gene3D - 208 301 IPR035920 -
Aip03g04111 440 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 86 438 - -
Aip03g04111 440 ProSiteProfiles CRM domain profile. 206 302 IPR001890 GO:0003723
Aip03g04111 440 SUPERFAMILY YhbY-like 326 416 IPR035920 -
Aip03g04111 440 MobiDBLite consensus disorder prediction 140 160 - -
Aip03g04111 440 Gene3D - 326 420 IPR035920 -
Aip03g04111 440 MobiDBLite consensus disorder prediction 68 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04111 Aip-Chr3 124903076 124906336 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04111 - - adu:107481137 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04111 03 124903076 124906336 Aip03g04111 03 124903076 124906336 ECH