Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04109 ATGGAAGAATTGTACCAGTGGAAGGAACAGCTTCTCCACTTGTGGAGCCTAGCCGAAGAGCAACTCCGTCAGGTTCCCCCAGTTCAGCTCTACGCTGCCGCCGCCGTCCTCGTTTTCACCACCCTGCTGCTCCTATCATTGCGGTTGTTGAAGCGTGCCAAGTCCAACACCATTGTATTGACTGGCCTAAGTGGCGCTGGCAAAACTGTTCTCTTCTATCAGCTTAGGGATGGCTCTATCCATGGGGGGACTGTTACGTCAATGGAACCTAATGAGGAGACTTTTGTTCTTCATTCTGAAACAACAGAGAAGCGGAAGACAAAACCCGTTCATGTTGTCGACGTCCCGGGACATTCTCGTCTTCGCCCCAAATTGGATGAATATTTGCCTCAGGCTGCTGGCATAGTTTTTGTTGTTGATGCTTTGGACTTCTTACCAAACTGCCGTTCTGCTTCAGAGTATCTATATGATATTTTGACAAAGGGAAGTGTTGTGAAGAAGAAGATTCCATTGCTTATTCTCTGCAACAAAACAGACAAGGTCACTGCTCATACGAAGGAGTTTATCAGCAGGCAGATGGAGAAGGAAATTGACAAATTACGGGCATCAAGAAGTGCAATATCGGCGGCAGACATTACAAATGAGTTCACCCTTGGGGTGCCGGGAGAACCATTTTCTTTTACCCAATGTTACAACAAAGTTACAACTGCAGATGCTTCTGGTTTAACTGGAGAGATATCTCAGTTGGAACAATTTATCAGAGAATATGTAAAGCCATAG 780 0.459 MEELYQWKEQLLHLWSLAEEQLRQVPPVQLYAAAAVLVFTTLLLLSLRLLKRAKSNTIVLTGLSGAGKTVLFYQLRDGSIHGGTVTSMEPNEETFVLHSETTEKRKTKPVHVVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRSASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHTKEFISRQMEKEIDKLRASRSAISAADITNEFTLGVPGEPFSFTQCYNKVTTADASGLTGEISQLEQFIREYVKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04109 259 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 18 259 IPR019009 -
Aip03g04109 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 193 IPR027417 -
Aip03g04109 259 PANTHER TRANSFERRIN 18 259 - -
Aip03g04109 259 CDD SR_beta 56 256 IPR019009 -
Aip03g04109 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Aip03g04109 259 Gene3D - 50 257 IPR027417 -
Aip03g04109 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Aip03g04109 259 TIGRFAM small_GTP: small GTP-binding protein domain 56 192 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04109 Aip-Chr3 124891190 124894202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04109 6 259 Miscellaneous Gene Families AT5G05670 71.765 9.64e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04109 K12272 - gmx:100800572 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04109 03 124891190 124894202 Aip03g04109 03 124891190 124894202 ECH