Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04108 ATGGCGAAAGAAAAGAAGCTCCAAGAACACCAACAAGAGAACGAAGCTCCAATCTATGGAGACATCTTAGAAACTATATTATCTCACGTGCCACTTGTCCACCTCGTGCCAGCCCGCCACGTGTCCAAGGCGTGGGAGCGCGCCGTCTCCACCTCCCTCCAAATCAACCCCATCAAGCCCTGGCTCACCGTGCATGTCCAGAGCCCACGTGCATATCACGTGACAACCTCCCACGCTTACGACCCACGCTCCCGTGCCTGGGTTCGGATCCACGCGCCTNNNNNNTGA 288 0.5556 MAKEKKLQEHQQENEAPIYGDILETILSHVPLVHLVPARHVSKAWERAVSTSLQINPIKPWLTVHVQSPRAYHVTTSHAYDPRSRAWVRIHAPXX 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04108 95 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 5 92 - -
Aip03g04108 95 Pfam F-box domain 21 50 IPR001810 GO:0005515
Aip03g04108 95 SUPERFAMILY F-box domain 21 51 IPR036047 GO:0005515
Aip03g04108 95 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04108 Aip-Chr3 124866481 124866768 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04108 - - adu:107481346 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04108 03 124866481 124866768 Aip03g04108 03 124866481 124866768 ECH