Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04097 ATGGAAAAGAAAATAATCATGTGCTTGCTTCATTGCTTGTCCATAGTAATGTGTTGCTTGTGTGGCAACTTAGTAACAGTGCATGCAATTGAAACACCAAAATACACAGTGATAAGGTCTGAATCAGATTTCCAAATCAGACTCTACTCTGAATCCACATGGATGTCAGCTCTTGTTCTTCCACCAACTTCCTTCGACAACTCCACCAAAACTGGATTCCACAGGTTGTATGAATACATTCACGGTGGCAATTTGAATTCATCAAAACTTGCATTCACTGCACCGGTCTTAACCAGCATGCCTTCATCAGGGGATGACTATGTTGTGAGGATGTATGTATCTGCTAGATTTCAGGGGAAACCGCCACTGCCAAATCAAGAGCTGAAGTTGCAGGTAGAGAAGTGGAAGGCTCAATGCATTGCAGTGAGGACCTTCAGTGGTTTTGCCGCAGATGATAACATTTACAAAGAGATTGAAGCTCTTATAAACAGTGTAAATAGACGGCGCGAAGATGGAAGAAGTTCAGGGACTATACAAGATAAGGGGTCATACACCATTGCTCAGTACAATGGTTCGTCTCATAACACAGGGCGCCTGAATGAAGTGTGGATCAATGTGTCTGGACTTACTTCAGAAGGTTGTCCACCTTCTCAGTGA 657 0.4292 MEKKIIMCLLHCLSIVMCCLCGNLVTVHAIETPKYTVIRSESDFQIRLYSESTWMSALVLPPTSFDNSTKTGFHRLYEYIHGGNLNSSKLAFTAPVLTSMPSSGDDYVVRMYVSARFQGKPPLPNQELKLQVEKWKAQCIAVRTFSGFAADDNIYKEIEALINSVNRRREDGRSSGTIQDKGSYTIAQYNGSSHNTGRLNEVWINVSGLTSEGCPPSQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04097 218 SUPERFAMILY Probable bacterial effector-binding domain 24 206 IPR011256 -
Aip03g04097 218 PANTHER HEME-BINDING PROTEIN-RELATED 6 215 IPR006917 -
Aip03g04097 218 Gene3D Regulatory factor, effector binding domain 29 211 IPR011256 -
Aip03g04097 218 Pfam SOUL heme-binding protein 30 204 IPR006917 -
Aip03g04097 218 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 6 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04097 Aip-Chr3 124671562 124672517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04097 - - adu:107481357 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04097 03 124671562 124672517 Aip03g04097 03 124671562 124672517 ECH