Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04080 ATGCGTGCATTTAGccacccaatcccagcatcaaccacaaaccaccgtcccaccctcctcatcatcGTTCACCCTTCTCCGCTAGCAACGTCGCGGACCTCCGCCAGTCCAGGAGCACCGCGCCAGCTTCTCCTCGTCACTATCACCATCGGCCTCAAACCAGAGCCTACCGCATCAGAGACCCTTGTCAGTGACCACCCCTCCTTCTCTCCTTCCCTGTCTCGGTCTTGTCGACCAGAGGACCTTCGCACCCACTCCGCCCCTACTTCGCTGCCGCTAGCAACCCTAGAGCCGCAGTACCCCCTTCTCCTCTTTTCACCGCCGACCACCCTCACCTACCGGGGCTACCTTCTCCTCATCACCGAACCAGTGCCCCTGACGGGCCACCGCACCAGCCGCCGCCACCGCAGTCCCCTTTGCGAACCGAATCACGGTGAAGGTTATGGTGATGAAAGAGTGGCAATGAGGTGGTTTGTGGCAAAGGTGGTTTGTGGCAAAGAAATAGAGGTTAGATCGGAGAGTGTTCATGGGTGGAGGCTAGTTCTGTTGAGACAGACAAGTTACGAAGCAGTTCGACAATGGGGTCAGGCGACGCGACGACGCGAAAGAGAATCTATTAGTTCTATTAGTGGGGTTGTGTGCATTGTCGTCGGCGCAAGAAGATTGGAATCGTTGTTGTGGCAAGCGGATGATCAGCAACGATTGTGCGGGCGGTGCAACGACGTGATTGAAGCTGAAGAAAATGATAGCAGAATAAATGACCTAGTTTTCACTAGTACCATTGCAACTAGAGTCACAGAATTGAGAATAACACATGATTTAGAGGGAAAGAAATTCGGCAAACTAGTCATGAAGTTCATGAAACTTGGATCTCGTCCTGATACCTTCTACACTGCTGATTCAGTAAGGGCAGTAACTTGTGAAGTTTCAAGTGACCTGATAATTCAAGTGAAAGGAAGCAGATACCTTCTTCACAAGTTTCCCCTTCTTTCCAAGTGTTTGCGGCTCCAAAGACTCTGCTCAGAGTCACCTGATTCAGGCCAGCCTCAGATAGTGCAGCTCCCTGACTTCCCCGGCGGCGCCGAGACATTTGAGCTCTGTGCAAAGTTCTGCTATGGAATGACCATAACACTCAGTGCCTACAACATTGTGGCGGCGCGCTGTGCCGCCGAGTACCTTCAGATGACTGAGGATGTAGAAAAAGGGAACTTGATATACAAGCTTGAAGTGTTCCTGAATTCTTGCATCCTCCATGGCTGGAAGGACTCAATTGTGACACTACAAACCACAAAATCAATGGCTCTGTGTCTGTGGTCAGAGGACTTGGCCATTACAAGCAGGTGCATTGAAGCCATAGCCTCAAAGGTCTTAAGCCACCCTTCTAAGGTGAGTTTGTCACATAGCCATTCTAGAAGGTTGAGAGATGATGTCTCTTCTTGCAATGGAACCGAAAGCATGAGGCACAAGTCAACAAGTAAGGGATGGTGGGCGGAAGATTTAGCAGAATTGACCATAGATTTGTACTGGAGAGCCATGATTGCTATCAAATCCGGCGGCAAGACGCCGTCCAATTTGATCGGCGATGCGCTCAAAATCTATGCCTCAAGGTGGCTGCCAAGCATCACAACAAAAAGCAATGGACATGCCAAGAACAAGAAGGAAGAATCTCAAGAGTTATCAGACTCAGATTCGGATTCAGCAAGCGAAATAGCCTCCAAGCATCGTTTACTTTTGGAATCTATAGTGAGCTTGCTACCTGCTGAAAGAGGTGCTGTTTCTTGCAGCTTTCTTCTTAAGCTCTTGAAGGCTTGCAATATTCTGAATGCATCTTGTTCTTCAAAGAGTGAATTGGCAAGAAGAGTAGGACTTCAATTGGATGAAGCAACAGTGAATGATCTTTTGATACCTTCACTTTCTCACACAAATGATATGGCTTATGATGTGGATTTGGTGATGGCAATATTGGAACAGTTTATGTCACAGGGGCAGAGTCCTCCAACTAGTCCTCCAAGAATGAGGATGATTGCCTGCGAGAGAAGGCGGTCGCGGTCGGCCGAGAACATTGATTTCGAGTTCCAGGAGAGCAGGAGGTCCTCCTCAGCTTCTCATGGATCAAAGTTGAAGGTGGCTAAGCTTGTGGATAGGTACCTTCAGGAGGTGGCCAGGGATGTCAACTTGCCTTTGTCAAAGTTCATTGCTCTTGCTGAGGCTATACCAGATTTTGCAAGACATGATCATGATGATCTATACAGAGCTATTGATACTTATCTCAAGGCTCATCCAGAACTGAATAAAAGCGAAAGAAAAAGACTATGTAGGATCCTAGACTGCAAGAAACTATCCATGGAAGCATGCATGCATGCAGCACAAAATGAGCTACTCCCTCTAAGAGTGGTTGTCCAAGTCCTCTTCTTTGAGCAAGCCAGAGCAGCAGCATCCGGCGGCGGCAACGGAAAAGTCGCCGACATACCAAGCAACATCAAGGCATTACTGAAAGCACATGGCATTGACCCTTCTTCAAAGCATCCCCCACCATTGAGTACCACCACAAGCATTCATGGTGATGATAACTGGAGTGTCAATGGACTCAAGACACCAAAGCCAACAACAACAGCAACAAGGAATCCAACTCTGAGAATGAAGCTAGCAGAGGATAAAGACATAGATAACATTACCAATGATGAAAATGGGAGAGCTGCTTCTAGATCTAAGGGTATTAATCAACCAAAACGAATGCTTAGTAAGTTCTGGTCTACAAACAAAGGTGTCACAGGAAAGAATTAG 2784 0.4691 MRAFSHPIPASTTNHRPTLLIIVHPSPLATSRTSASPGAPRQLLLVTITIGLKPEPTASETLVSDHPSFSPSLSRSCRPEDLRTHSAPTSLPLATLEPQYPLLLFSPPTTLTYRGYLLLITEPVPLTGHRTSRRHRSPLCEPNHGEGYGDERVAMRWFVAKVVCGKEIEVRSESVHGWRLVLLRQTSYEAVRQWGQATRRRERESISSISGVVCIVVGARRLESLLWQADDQQRLCGRCNDVIEAEENDSRINDLVFTSTIATRVTELRITHDLEGKKFGKLVMKFMKLGSRPDTFYTADSVRAVTCEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRLCSESPDSGQPQIVQLPDFPGGAETFELCAKFCYGMTITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKLEVFLNSCILHGWKDSIVTLQTTKSMALCLWSEDLAITSRCIEAIASKVLSHPSKVSLSHSHSRRLRDDVSSCNGTESMRHKSTSKGWWAEDLAELTIDLYWRAMIAIKSGGKTPSNLIGDALKIYASRWLPSITTKSNGHAKNKKEESQELSDSDSDSASEIASKHRLLLESIVSLLPAERGAVSCSFLLKLLKACNILNASCSSKSELARRVGLQLDEATVNDLLIPSLSHTNDMAYDVDLVMAILEQFMSQGQSPPTSPPRMRMIACERRRSRSAENIDFEFQESRRSSSASHGSKLKVAKLVDRYLQEVARDVNLPLSKFIALAEAIPDFARHDHDDLYRAIDTYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAASGGGNGKVADIPSNIKALLKAHGIDPSSKHPPPLSTTTSIHGDDNWSVNGLKTPKPTTTATRNPTLRMKLAEDKDIDNITNDENGRAASRSKGINQPKRMLSKFWSTNKGVTGKN 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04080 927 MobiDBLite consensus disorder prediction 837 876 - -
Aip03g04080 927 Gene3D Potassium Channel Kv1.1; Chain A 300 401 IPR011333 -
Aip03g04080 927 CDD BTB_POZ_NPY3-like 311 407 - -
Aip03g04080 927 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 284 921 - -
Aip03g04080 927 MobiDBLite consensus disorder prediction 58 86 - -
Aip03g04080 927 MobiDBLite consensus disorder prediction 544 565 - -
Aip03g04080 927 PANTHER OS12G0117600 PROTEIN 284 921 IPR043454 -
Aip03g04080 927 SUPERFAMILY POZ domain 306 398 IPR011333 -
Aip03g04080 927 MobiDBLite consensus disorder prediction 912 927 - -
Aip03g04080 927 ProSiteProfiles NPH3 domain profile. 494 809 IPR027356 -
Aip03g04080 927 MobiDBLite consensus disorder prediction 61 77 - -
Aip03g04080 927 MobiDBLite consensus disorder prediction 889 927 - -
Aip03g04080 927 MobiDBLite consensus disorder prediction 842 876 - -
Aip03g04080 927 Pfam NPH3 family 495 785 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04080 Aip-Chr3 124427224 124435366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04080 309 817 EF-hand Containing Proteins AT3G44820 36.069 1.06e-91 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04080 - - adu:107481370 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04080 03 124427224 124435366 Aip03g04080 03 124427224 124435366 ECH