Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04021 ATGGAGCCAGCAAACACGCGCAACCACTCCTCCAAACGCAAGTACGACGACGCCATTTCACCGCCACAACCACCACCCGCGTTAACGTCCAACGGCACTGTCGCTGACAACAACGTCGATCTCTCCCTTCTCGAAGCAATAGAGAAATCGCAGAACGCCGTGGAAGCCCTCGACCTCCGAACCCTAAAGAAGCTTGTCCTCGCCTTCGAGCGCCGCCTCAAGGAGAACATCGAGGCCCGCCTCAAGTACTCGAATCAACCAGACCGATTCGCCGATTCGGAACTGGACCTCCACGAGGAGCTTCAGAAACTGAAGATCCTCGCCGGAGCCCCTGAGCTCTACCCTGACCTTGTCGCGCTCAACGTCGTCCCCTCCATCGTCGACCTCCTCAACCATGACAACACTGACATCGCCATCGACGTCGTTCAGCTCCTCCAGGACCTCACTGACGAGGATGTCCTCGATGACAACGATGAACCGGCTAAGGTTTTAGTTGATGCTTTGATAGAGAACAGTGTTCTCGAGCTCCTGGTGCAGAATCTCCATCGGCTCAACGATTCTGATCCCGACGATTCTGCCGCAGTTTACGCGACGCTCGCAACGATAGAGAATCTGATCGAAGTGAAGCCGGCAGTGGCAGAGTTAGTTTGCGAGAAGACGAAGCTGATGAAGTGGCTGCTTGGGAAGATTAAGGTTAGGGAATTCGATGGGAATAAGCAGTATGCATCGGAGATTCTGGCGATTCTGCTGCAGAGCAGCACGGCAAACCAAAAGAGGCTGGGGCAAATGAATGGGGTGGATGTGGTGCTGCAGGCGGTGGCAATGTACAAGAGCAGGGACCCCAAGAGCTCTGATGAAGAGGAGATGCTGGAGAATCTGTTTGACTGCTTGTGCTGCCTGTTGATGCCATTGGAGAACAAGGAGCGTTTTGTTAAGGCTGAAGGAGTGGAGTTGATGATCATCATCATGAAGCAGAAGAAACTGGCTTATGGGTCGGCCATAAGGGCGCTTGATTTTGCAATGACCAAGTACCCTCCAGCTTGTGAACGGTTTGTGGATGTCTTGGGGTTGAAAACGGCGTTTGCAGCTTTTATGGGTAAGATTCCTGTCAATAAAAAGAACAAGAAAGAAAGGTACCAAGAGGAATTGGAGGAGCGCATTGTGTCACTGATTTCTTCATTATTTGGTGGGATCTTAAGGGGTTCTAGGAGAGAAAGATTGTTAAGTAAATTTGTTGAAAATGAGTGTGAGAAGATAGACAGGCTAATGGAACTATACATGAGATATTCAGATAGAGTCAAAGCAGAATCTGAACGGTTGAATGAAGTTGAGCTTGATGACTTGGAGATGGATGAGGACGAGAAATACAATCGTAAACTGGAAGCTGGACTTTATACTCTTCAGGTAAAATTTTGTTTCACTTTTATACACTTAATATCCTTATAA 1446 0.491 MEPANTRNHSSKRKYDDAISPPQPPPALTSNGTVADNNVDLSLLEAIEKSQNAVEALDLRTLKKLVLAFERRLKENIEARLKYSNQPDRFADSELDLHEELQKLKILAGAPELYPDLVALNVVPSIVDLLNHDNTDIAIDVVQLLQDLTDEDVLDDNDEPAKVLVDALIENSVLELLVQNLHRLNDSDPDDSAAVYATLATIENLIEVKPAVAELVCEKTKLMKWLLGKIKVREFDGNKQYASEILAILLQSSTANQKRLGQMNGVDVVLQAVAMYKSRDPKSSDEEEMLENLFDCLCCLLMPLENKERFVKAEGVELMIIIMKQKKLAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERIVSLISSLFGGILRGSRRERLLSKFVENECEKIDRLMELYMRYSDRVKAESERLNEVELDDLEMDEDEKYNRKLEAGLYTLQVKFCFTFIHLISL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04021 481 SUPERFAMILY ARM repeat 101 436 IPR016024 -
Aip03g04021 481 PANTHER BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN 14 477 IPR039678 -
Aip03g04021 481 Pfam Catenin-beta-like, Arm-motif containing nuclear 44 469 IPR013180 -
Aip03g04021 481 MobiDBLite consensus disorder prediction 1 16 - -
Aip03g04021 481 MobiDBLite consensus disorder prediction 1 32 - -
Aip03g04021 481 Gene3D - 55 480 IPR011989 -
Aip03g04021 481 SMART DUF1716_2 36 142 IPR013180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04021 Aip-Chr3 123707997 123711770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04021 K12864 - gmx:100788964 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04021 03 123707997 123711770 Aip03g04021 03 123707997 123711770 ECH