Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04015 ATGGATACTCTTCCAAAATGCGAAGCAAACTTCACCGCACTGACCCCTCTAACTTTCTTGACGAGGGCAGCTGCATGCTATGCCAACAGACCCTCCATCATCCATGAAGGAACCCGTTTCACATGGTCACAAACCTACCACCGCTGCCGCCGCCTCGCTTCCTCCCTGCGTGCCCTCAATATCGCTAACAAGGACGTCGTGTCAGTGCTGGCACCTAACATCCCAGCAATGTACGAGATGCATTTCGCAGTTCCCATGGCGGGAGCAGTGCTCAACACCATCAACACTCGTCTTGACGCCAAGAACATAGCCGCCATTCTCAAGCACTCGGAAGCCAAAGTCTTCTTCGTGGACTACGAGCTTGTCCCCAAGGCGAGGGACGCCTTGAGATTGCTGGTAGGACAAACTGAACCAGCACAATACGCATGTCTTCCTCTAGTCATCGTCATAGACGACATAAACTCCCCCACGGGGATCCGCCTGGGCGAGCTTGAATACGAGCAAATGGTTCGCCAAGGCGATCCAAACTTTGTGGTGGATGAAATCCACGACGAATGGTCTCCAATCTCGCTGAATTACACATCGGGAACAACCTCAGAGCCGAAAGGAGTTGTGTACAGCCACAGGGGTGCGTATCTGAGCACCCTGAGTTTGATTCTCGGTTGGGAGATGGGTAGTGAGCCAGTTTACCTCTGGACTCTGCCTATGTTCCATTGCAATGGGTGGACCTTCACATGGGGAGTGGCAGCACGTGGGGGAACCAATGTTTGTCTTAGGAACACTGTGGCATCTGACATATACACAAACATTGTTCTCCACAACGTCACACACATGTGTTGCGCTCCAATTGTCTTTAACATCCTCCTCGAGGCCAAGCCCAGCGACCGCCTCCAGTTCAAGTCCAAGGTGGAGATATTAACCGGCGGCGCGCCCCCGCCGGCTTCCCTTCTTGAAAAAGTGGAGTCCCTTGGGTTCCATGTGACACATGCCTACGGCCTGACGGAGGCGACAGGGCCCGCTTTAGTGTGCGAGTGGCAGAAAAGATGGAACCAGCTTCCAGTACAACAGCAGGCGGAGCTAAAGGCAAGACAGGGCGTCAGCGTGGTCACGATGGCTGACGTGGACGTCAAGAATCTAGAAACAATGGAGAGCGTGGCGCGTGACGGGAAAAGAATGGGGGAGATTATGCTTAGGGGAAGTGGCATAATGATGGGATACTTCAAGGACCCTAAAGCAACCTCAAAAGCTTTCGAGAATGGTTGGTTCAGAACCGGAGATGTGGGTGTAATTCACCCTGATGGCTACTTGGAAATCAAGGATAGGTCAAAGGATGTGATTATCTCGGGAGGCGAGAATATAAGCAGTGTGGAAGTTGAGAAGGTTCTGTACGGACACCCGAGGGTGCTGGAGGCTGCGGTGGTGGCAATGCCGCACCCGAGGTGGGGTGAGAGCCCTTGTGCCTTTCTCTCACTCAAGAAGAATCCTTCTGGGAAAAAAGATCATGTCACTCAGGCTGAGGTAATTGCTTACTGTAGGAAGAATTTGCCGCATTTTATGGTTCCTAAGGTGGTTAAGTTCTTGGACGAGTTGCCCAAGACGGCCACCGGCAAGTTTCAGAAGGTTCAGTTGAGGGCCATGGCCAAACAGTTTGTGGTGCCGCCGGAGAATGACCAGCAGCAGAACAAGCCCAAGAAGTCAACGAGCCAGGTCAACAACAACAATAATAATAATAATAATAACATTGAGCAGGTTTTAGCTGTTTCTCGTCTTTGA 1773 0.5189 MDTLPKCEANFTALTPLTFLTRAAACYANRPSIIHEGTRFTWSQTYHRCRRLASSLRALNIANKDVVSVLAPNIPAMYEMHFAVPMAGAVLNTINTRLDAKNIAAILKHSEAKVFFVDYELVPKARDALRLLVGQTEPAQYACLPLVIVIDDINSPTGIRLGELEYEQMVRQGDPNFVVDEIHDEWSPISLNYTSGTTSEPKGVVYSHRGAYLSTLSLILGWEMGSEPVYLWTLPMFHCNGWTFTWGVAARGGTNVCLRNTVASDIYTNIVLHNVTHMCCAPIVFNILLEAKPSDRLQFKSKVEILTGGAPPPASLLEKVESLGFHVTHAYGLTEATGPALVCEWQKRWNQLPVQQQAELKARQGVSVVTMADVDVKNLETMESVARDGKRMGEIMLRGSGIMMGYFKDPKATSKAFENGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEVEKVLYGHPRVLEAAVVAMPHPRWGESPCAFLSLKKNPSGKKDHVTQAEVIAYCRKNLPHFMVPKVVKFLDELPKTATGKFQKVQLRAMAKQFVVPPENDQQQNKPKKSTSQVNNNNNNNNNNIEQVLAVSRL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04015 590 Pfam AMP-binding enzyme 21 448 IPR000873 -
Aip03g04015 590 CDD ttLC_FACS_AEE21_like 11 545 - -
Aip03g04015 590 Gene3D - 3 443 IPR042099 -
Aip03g04015 590 Pfam AMP-binding enzyme C-terminal domain 457 537 IPR025110 -
Aip03g04015 590 MobiDBLite consensus disorder prediction 552 582 - -
Aip03g04015 590 PANTHER ACYL-ACTIVATING ENZYME 1 564 - -
Aip03g04015 590 PANTHER BUTYRATE--COA LIGASE AAE11, PEROXISOMAL 1 564 - -
Aip03g04015 590 MobiDBLite consensus disorder prediction 553 582 - -
Aip03g04015 590 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Aip03g04015 590 Gene3D - 444 580 IPR045851 -
Aip03g04015 590 SUPERFAMILY Acetyl-CoA synthetase-like 10 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04015 Aip-Chr3 123605038 123607143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04015 1 550 Miscellaneous Gene Families AT3G16910 50.000 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04015 K23618 - gmx:100792142 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04015 03 123605038 123607143 Aip03g04015 03 123605038 123607143 ECH