Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04004 ATGGCTGCTGCTTCTTCTTCAGCACCGAAGTTGAAGCGCACGAATTCCATAACGGAGAACATGCCGGATGCATTGAGGCAGAGTAGGTACCATATGAAGAGGTGCTTTGCCAATTACTTAGAGAAGGGAAGAAGGATAATGAAACTCCATCACCTGATGGAGGAAATGGAGCAAGTCATAGATGACAAGACTGAAAGGGATCATGTCTTGGAGGGCAATCTTGGCTTTATATTGAGCCATACACAGGAAGCTGTTGTTCATCCACCATATGTCGCGTTTGCTGTGAGGCAAAGTCCTGGAGTTTGGGAACATGTCAGAGTCAACTCTGAGGACCTTAAAGTTGAGGCTATAACCTCCACTGACTACCTCAAATTCAAGGAACGGGTCTATGATGAAAATTGGGCAAACGATGAAAACTCATTCGAAGCGGATTTTGGAGCTTATGATTTCCCCATTCCCCGTTTAATCTTACCATCTTCGATCGGAAATGGACTCCATTTTGTCTCAAAGTTCTTAACATCAAAGTTTAGTGGCAATTTGTCAAAAACACAGCCTATAGTGGACTACTTGTTATCACTGAATCATCAAGGAGAAAAACTGATGCTGAATGAGAGACTGAACACTGCTGCAAAGATTCAGCTTGCACTTATTGTGGCTAATGCATATCTCTCAGCAACTCCCATGGATGCTCCCTACCAAGATTTTGAGCTAAGGCTTAAGGAATGGGGATTTGAGAAAGGATGGGGAGACACTGCAGGAAGAGTGAAGGAGACAATGGGATTTTTGTCAGAAGTGCTCCAAGCTCCAGATCCAGTGAATCTTGAGAAGTTCTTCAGCAGAGTTCCCACAATATTCAATGTTGTCATCCTTTCCATCCATGGTTATTTTGGCCAAGCTGATGTTCTTGGATTGCCAGACACTGGTGGACAGGTAGTTTACATATTGGATCAAGTGAGAGCTCTGGAGGCAGAGTTGCTTATGAGAATTAAGCAACAAGGGCTAAATGTGAAGCCTCAGATTCTTGTGGTCACAAGGCTCATACCAAATGCTCAAGGAACCAAATGCAACCAAGAGTTGGAACCAATCATTGATACCAAGCACTCCAACATTCTGCGCGTGCCTTTCCAAACTGATAATGGAGTCTTGCGTCAATGGGTTTCTCGCTTTGATATTTATCCTTATCTTGAGAGGTTTTCTCAGGATGCCACAGCCAAGGTGCTAGACTTCATGGAAGGGAAACCGGATCTTATTATTGGAAATTACACTGATGGAAATTTGGTAGCTTCTCTTATGGCTAACAAACTTGGGATAACCCAGGGAACTATAGCGCATGCTTTAGAGAAAACTAAGTATGAAGATTCAGATGTCAAGTGGAAAGAACTAGACCCCAAGTATCATTTCTCAAGTCAATTCATGGCCGATACAGTAGCAATGAATGCGGCTGATTTCATCATAACCAGCACCTATCAGGAAATTGCAGGAAGCAAAGATAGACCTGGACAATATGAAAGTCATGCAGCATTTACACTCCCAGGGCTCTGCAGGGTTGTTTCAGGTATAAATGTATTTGATCCCAAGTTCAACATAGCTGCACCTGGAGCAGACCAATCTGTCTATTTTCCTAACACAGAGAAAGACAAAAGACTCACTAAATTTAATGCTGCCATTGAGGAACTATTATATAGCAAAGTTGATAACAAAGAGCATATTGGGTATCTAGAAAACAGAAGAAAACCAATCATATTCTCAATGGCAAGGTTTGATGTTGTCAAGAACTTAACCGGCTTAGCCGAATGGTATGGGAAGAACCAGAGATTGAGAAACCTGGTGAACCTTGTCATAGTAGGAGGCTTCTTTGACCCTTCAAAATCCAAAGATAGGGAGGAAATGGCAGAAATAAGAAAGATGCATGATTTGATTGAAAAGTACCAACTCAAGGGTCAATTTAGATGGATAGCTGCACAGACGGATAGATATCGAAATGGTGAGCTCTATCGCTTCATTGCTGATACGAAAGGAGCTTTCGTGCAGCCTGCTTTGTATGAAGCATTTGGCCTTACTGTCATTGAAGCAATGAACTGTGGCTTGCCTACTTTTGCAACCAACCAAGGAGGTCCAGCTGAAATCATTGTAGATGGGATCTCTGGCTTCCATATTGATCCCCTTAATGGAGAAGAATCAAGCAACAAAATTGCTGATTTCTTTGAAAAATGCCAAGTAGATTCAACATATTGGGACAAGGTTTCTGCGGCCGGATTGCAGCGCATAGACGAATGCTATACCTGGAAGATCTATGCAAACAAGTTGCTAGATATGGGAAACATTTATGCATTTTGGAGGAGAGTGAATAATGAGCAAAAAGAGGCCAAGAAGAGATACATTCAGATGTTCTACAATCTTATGTTAAAAAATTTGGTGAAGACTATACCGGTTCCAAGTGATATACCTCCACCACCTCCTCCACCACCTCAACCAGTGCCAAAGCAGCAGAGTATGAAGAAACAAGGAACTAGCAGACGTTCACAGTCCAAATTGCAAAGCTTATTTGGAGCATAA 2556 0.4221 MAAASSSAPKLKRTNSITENMPDALRQSRYHMKRCFANYLEKGRRIMKLHHLMEEMEQVIDDKTERDHVLEGNLGFILSHTQEAVVHPPYVAFAVRQSPGVWEHVRVNSEDLKVEAITSTDYLKFKERVYDENWANDENSFEADFGAYDFPIPRLILPSSIGNGLHFVSKFLTSKFSGNLSKTQPIVDYLLSLNHQGEKLMLNERLNTAAKIQLALIVANAYLSATPMDAPYQDFELRLKEWGFEKGWGDTAGRVKETMGFLSEVLQAPDPVNLEKFFSRVPTIFNVVILSIHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLMRIKQQGLNVKPQILVVTRLIPNAQGTKCNQELEPIIDTKHSNILRVPFQTDNGVLRQWVSRFDIYPYLERFSQDATAKVLDFMEGKPDLIIGNYTDGNLVASLMANKLGITQGTIAHALEKTKYEDSDVKWKELDPKYHFSSQFMADTVAMNAADFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPNTEKDKRLTKFNAAIEELLYSKVDNKEHIGYLENRRKPIIFSMARFDVVKNLTGLAEWYGKNQRLRNLVNLVIVGGFFDPSKSKDREEMAEIRKMHDLIEKYQLKGQFRWIAAQTDRYRNGELYRFIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGISGFHIDPLNGEESSNKIADFFEKCQVDSTYWDKVSAAGLQRIDECYTWKIYANKLLDMGNIYAFWRRVNNEQKEAKKRYIQMFYNLMLKNLVKTIPVPSDIPPPPPPPPQPVPKQQSMKKQGTSRRSQSKLQSLFGA 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04004 851 MobiDBLite consensus disorder prediction 811 851 - -
Aip03g04004 851 Pfam Sucrose synthase 13 561 IPR000368 GO:0005985|GO:0016157
Aip03g04004 851 MobiDBLite consensus disorder prediction 829 851 - -
Aip03g04004 851 PANTHER - 8 827 IPR012820 GO:0005985|GO:0016157
Aip03g04004 851 Gene3D Glycogen Phosphorylase B; 288 805 - -
Aip03g04004 851 PANTHER SUCROSE SYNTHASE 8 827 - -
Aip03g04004 851 Gene3D - 15 153 - -
Aip03g04004 851 Gene3D Glycogen Phosphorylase B; 535 762 - -
Aip03g04004 851 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 303 771 - -
Aip03g04004 851 Pfam Glycosyl transferases group 1 567 736 IPR001296 GO:0016757
Aip03g04004 851 Gene3D - 154 283 - -
Aip03g04004 851 TIGRFAM sucr_synth: sucrose synthase 30 810 IPR012820 GO:0005985|GO:0016157
Aip03g04004 851 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g04004 851 Coils Coil 46 66 - -
Aip03g04004 851 MobiDBLite consensus disorder prediction 811 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04004 Aip-Chr3 123381932 123386217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04004 9 814 Glycosyltransferase AT4G02280 56.576 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04004 K00695 - gmx:100809674 1440.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04004 03 123381932 123386217 Aip03g04004 03 123381932 123386217 ECH