Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03523 ATGGTGCTGCTACCCATCTTGCATGTAACCCTCTTGCAATTAACACTGGCCTCATTTTCAGCAGCCATTGATCCAACACAAGGGTTCACCCAACTCCCAATAAGCAACTCAAATTTCCAGGTCCAAAAGCCTTACGATGTTCCACAAAACCAGCGTTACACCTTCATAGATGGGGTTCATAAATTCTGGGTGTACTCCACCGACAAGCCTTTCGAACCATCCAGCACCACCCTGCCACGAACCGAGATTCGCATTACGGGATATGATTATACATCCGGTGTGTGGCAATTTGAAGGGGACTTTTACGTGCCGAGTGGAACAAGCGGTGTGAGCATCATGCAAGTGTTCGGTGGAAGCTCCTCTGCCACAACGTTGCAGCTTAGGGTGTATGATGGTTCTCTTAAGGCTTATAGGGATCCTGTTGTGCTGGACAACATCTACAATAGATGGTTCAGGCTGAATGTGATTCATGATGTTGGTGCCAACAACGTCAAGGTTTACATTGATGGGAATCTCAATTTTGATGGTGCTGGTCGTGGACCCGGTACTTTCTACTTCAAGTTTGGGGTTTATACTCAGAATGATCCTTCCAACTATATGGAATCTCGTTGGAGGGATATTAAACTCTTTAGAAAGTAG 639 0.4585 MVLLPILHVTLLQLTLASFSAAIDPTQGFTQLPISNSNFQVQKPYDVPQNQRYTFIDGVHKFWVYSTDKPFEPSSTTLPRTEIRITGYDYTSGVWQFEGDFYVPSGTSGVSIMQVFGGSSSATTLQLRVYDGSLKAYRDPVVLDNIYNRWFRLNVIHDVGANNVKVYIDGNLNFDGAGRGPGTFYFKFGVYTQNDPSNYMESRWRDIKLFRK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03523 212 Pfam Alginate lyase 37 209 IPR014895 -
Aip03g03523 212 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 200 IPR013320 -
Aip03g03523 212 Gene3D - 18 211 - -
Aip03g03523 212 PANTHER ALGINATE LYASE 11 212 - -
Aip03g03523 212 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 11 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03523 Aip-Chr3 115067296 115068124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03523 - - gmx:547636 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03523 03 115067296 115068124 Aip03g03523 03 115067296 115068124 ECH