Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03506 ATGGAAGTAATTGACGGTTGTGACGATGATGAACGGAATCCTAATGTTGACGGTGATGGGGTGATGGTTTCGGTTCCGAATTGCTACTATCCACTTCCAAAGTTCGCGTTTTTTACCCTCAGATGTTCCGCCGTTAAAGGAGAAAGACCTTGGAAGACATTAGATGCTAGGCTTGTTTTGGAAGATGGGTCAATCTGGAAAGCAAAGTCATTTGGTGCTACAGGAACCCAAGCTGGCGAAGTAGGTTTCAATACATCATTAACTGGGTATCAAGAAATTCTAACTGATCCTAGTTAG 297 0.431 MEVIDGCDDDERNPNVDGDGVMVSVPNCYYPLPKFAFFTLRCSAVKGERPWKTLDARLVLEDGSIWKAKSFGATGTQAGEVGFNTSLTGYQEILTDPS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03506 98 Pfam Carbamoyl-phosphate synthase small chain, CPSase domain 58 98 IPR002474 -
Aip03g03506 98 PANTHER CARBAMOYL-PHOSPHATE SYNTHASE SMALL CHAIN 32 98 - -
Aip03g03506 98 Gene3D - 54 98 IPR036480 -
Aip03g03506 98 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 32 98 - -
Aip03g03506 98 SUPERFAMILY Carbamoyl phosphate synthetase, small subunit N-terminal domain 55 98 IPR036480 -
Aip03g03506 98 SMART CPSase_sm_chain_2 54 98 IPR002474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03506 Aip-Chr3 114801024 114803334 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03506 K01956 - adu:107480294 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03506 03 114801024 114803334 Aip03g03506 03 114801024 114803334 ECH