Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03481 ATGGCTTCTTCTAAGATCTTCTTATACCATTTACTTCTCCTGTTTTTTGTACTTGGAGACCCAAGATTATATGCGAATGGGGACACCAAGTTAATGAAGAAAACATGCAGGCACACAAAGTACTACGATCTATGCTTCTCTTCCCTGAAATCAGATCCAACAAGTTCAAACGCGGACCCAAGGGGACTAGCAATGATCATGGTTGGGGTTGCCATGGCCAATGCAACATCCACTTCTTCCTACTTGTCTTCTCAGTTGCATAACCCGGCCACCAATGACACTACCTTCAAAAGGGTCCTTAAAGAATGTTTAGACAAGTACACATATGCAGGTGAATCACTTCAAGCTTCTGTTCAAGATTTGGCTGATCAAGTCTATGATTATGCTTACATGCACGTTTCTGCGGCCAAAGATTATCCAAATGTTTGCCACAACTTGTTCAAACAGAATCCTGCTTTGGTTTACCCTCCTGAACTTGCTCGTAGAGAGAATGCTTTGAAGCATATATGTGATGTTGCCATGGGGATTATTGATGATTTTAATTGGTATTAG 552 0.413 MASSKIFLYHLLLLFFVLGDPRLYANGDTKLMKKTCRHTKYYDLCFSSLKSDPTSSNADPRGLAMIMVGVAMANATSTSSYLSSQLHNPATNDTTFKRVLKECLDKYTYAGESLQASVQDLADQVYDYAYMHVSAAKDYPNVCHNLFKQNPALVYPPELARRENALKHICDVAMGIIDDFNWY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03481 183 Pfam Plant invertase/pectin methylesterase inhibitor 31 175 IPR006501 GO:0004857
Aip03g03481 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 178 IPR035513 -
Aip03g03481 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 178 IPR006501 GO:0004857
Aip03g03481 183 CDD PMEI_like 36 178 - -
Aip03g03481 183 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 16 179 - -
Aip03g03481 183 SMART PMEI_2 27 176 IPR006501 GO:0004857
Aip03g03481 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 179 - -
Aip03g03481 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03481 Aip-Chr3 113737022 113738082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03481 - - adu:107480265 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03481 03 113737022 113738082 Aip03g03481 03 113737022 113738082 ECH