Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03479 ATGGAGGTTGAGAAGGCGTTATTAGTAGAGAAACCCATATTTATTGAACCAAGCATTATTGATAATGATGATTGGGTAGTTTCATCCAAATCAGAAACGAGTAACATTGATTTGTGCAACCATTTTGAAACCTTTAAGATGCTTGTAAAGATGGAACTACCATGTAATAATAATGAATCTGTTGAGGAAAAGCTTCGTTGGCTTAGATCTCAGATGATAGGTAACGCTGCTGAGTTCTATTCTCCATTTGGAAGAAGAGAACTTGTATATGCTGATCACACTGCTTCAGGTCGCAGCCTTCAATACAATGAAGATTTCATCATCAAACATGTTCTTCCTTTTTATGGCAATACTCACACGTGTGACAGTTATGTGGGAAGTAGAAGCACAAGAATTTTGCATGAAGCAAGCGAGTACATTAAGGAATGCTTAGGAGGTGGAGAAGAAAATGCAATCATATTCTGTGGTTCGGGGACAACCGCAGCCATCAAGAGGCTCCAAGAAGTAATGGGCATCGCGGTGCCCTCAATTCTGAGGGAAAGGGTGGTAAAGAGCCTCAGCAAAGAAGAAAGATGGGTTGTGTTTGTGGGACCCTACGAGCACCATTCCAACCTGCTTTCATGGCGGCAAAGCTTGGCCGAAGTAGTTGAGATTGGCCTCGATGATGAAGGCTTGCTAGACATGGATGCCCTTAAGCTACAACTTGAGGCCTACAAAAATACCAACAGACCCTTGTTGGGATCTTTCTCTGCTTGTAGCAATGTCACCGGGATAAACTCCGACACGCCAGCCATTGCTCGCCTTCTTCATCAATACAACGCCTTTGCATGCTTTGATTTTGCAGCAAGTGGGCCATATGTGGAGATTTGCATGAGGAGAGAGAAGAGTAGGGATGATTGGTATGATGCAGTGTTCTTGAGTCCGCACAAGTTTGTTGGTGGTCCTGACACGCCGGGAATTCTCCTCATGAACAAGGCACTGTACAGGTTGAATTCTTCCCCACCCTCCATTTGTGGAGGTGGCACTGTGAATTATGTCAACGGCTTCGACGAGAAGGATACGTTATACTTGGAGAACATAGAAGAAAGGGAAAATGGGGGCACCCCTCCAATAATCCAAACAGTAAGAGCAGCCTTAGCATTTTGGGTGAAAGAATATATTGGCTACAAAGAGATTGAAATAAGGGAACAAATATACATTAACAGGGCACTTAAGAGGCTCATCTCAAACCCTAACATTAAGGTTTTGGGAAACAAAAGCACCAAAAGACAAGCTATTTTGTCCTTTGTGATTTATTCTACCTCCAATTCCTCATCAACATGTTGGGGCAACGATCAAAACCAAGAAAATAGTAATGAAGAGGAACTTAATTTGTGGGAAGAGATTGGGAACTACAAAAGGGGTAAATTACTTCATGGACCTTTTGTTGCAACATTGCTCAATGACCTATTTGGCATTCAAGCTCGTGGTGGGTGCGCTTGTGCTGGACCTTATGGCCACCATTTGCTCAATATCAACAAAACTCAATCTCTTGATGTTAGGTCAGCCATTCAACAGGGTTATGTTGGAATAAAACCTGGATGGACCAGAGTGAGTTTTCCCTATTACATGGACGAAGAGGATTTTGAGTTCATTCTAGCAGCCATAGAGTTTGTAGCCATGTATGGCCAACGGTTCCTTCCTCTTTACAGCTTCAACTTGAGAAATGGAAGATGGAGAGTAGTGAAGACTCAGGAACTTGGGGCTCTAATAAAGGAAAACAACAATAATAATAATTATTGCAACTATAGAAGAACTATGGAGGAAACAAGCGTTGAGTATGATAATGGGGTTAATAATAAGCAAGTTAGAATGTTGAGGAGAAAATCTTACCTTGACATGGCTAAGTATATCGCTACTCGCCTCCCAAAGTTCCCTTCTCAAACCATGCTAATGGAAAACGTAAATCCCAGTGCACTCCATTTTAGAATTTAA 1974 0.4205 MEVEKALLVEKPIFIEPSIIDNDDWVVSSKSETSNIDLCNHFETFKMLVKMELPCNNNESVEEKLRWLRSQMIGNAAEFYSPFGRRELVYADHTASGRSLQYNEDFIIKHVLPFYGNTHTCDSYVGSRSTRILHEASEYIKECLGGGEENAIIFCGSGTTAAIKRLQEVMGIAVPSILRERVVKSLSKEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDDEGLLDMDALKLQLEAYKNTNRPLLGSFSACSNVTGINSDTPAIARLLHQYNAFACFDFAASGPYVEICMRREKSRDDWYDAVFLSPHKFVGGPDTPGILLMNKALYRLNSSPPSICGGGTVNYVNGFDEKDTLYLENIEERENGGTPPIIQTVRAALAFWVKEYIGYKEIEIREQIYINRALKRLISNPNIKVLGNKSTKRQAILSFVIYSTSNSSSTCWGNDQNQENSNEEELNLWEEIGNYKRGKLLHGPFVATLLNDLFGIQARGGCACAGPYGHHLLNINKTQSLDVRSAIQQGYVGIKPGWTRVSFPYYMDEEDFEFILAAIEFVAMYGQRFLPLYSFNLRNGRWRVVKTQELGALIKENNNNNNYCNYRRTMEETSVEYDNGVNNKQVRMLRRKSYLDMAKYIATRLPKFPSQTMLMENVNPSALHFRI 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03479 657 Gene3D Aspartate Aminotransferase, domain 1 362 557 IPR015422 GO:0003824
Aip03g03479 657 Pfam Aminotransferase class-V 105 433 IPR000192 -
Aip03g03479 657 Gene3D - 107 339 IPR015421 GO:0003824
Aip03g03479 657 PANTHER - 26 657 - -
Aip03g03479 657 PANTHER CYSTEINE DESULFURASE 26 657 - -
Aip03g03479 657 SUPERFAMILY PLP-dependent transferases 83 550 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03479 Aip-Chr3 113604948 113609279 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03479 - - gmx:100776921 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03479 03 113604948 113609279 Aip03g03479 03 113604948 113609279 ECH