Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03478 ATGTTGCGTTACGTAAACAAAATCATACACCACATTATTCACTTGTTCCTCATGGAGATAGAACCCATATTACTAGCGGAGCCATGCATAGTTCAAAGCAAGAGAAGCAAGGTCGTTGAAGATAACAGCAAGGTTGTCGTTTTGTCAAAAACAAGTGTCTTGTCAGAAACATCTCAGGATTTTTGCAACCACTCTGAGTCATTTGAAAAGCTGGTACGGATTGGCCTCCCCTGCAATGACTCTGTTGAAGAAAAACTCTGTTGGCTTCGGTCCCAGATGATAGGTAACGATGCTGAGTTCGATTCTCCGTTTGGAAGAAGAAAACTTGTGTATGCTGATCACACTGCTTCAGGCCGCAGCTTACATTTCAATGAAAACTTCATCACCGATCATCTTCTTCCTTTCTATGGTAACACTCACACTTGTGACAGTTACGTGGGAAGCAGGACGACAAAAATGCTGCATGAAGCAACCACATACATTAAAAGTTGCCTTGGCGGTGGAGAAGAAGATACAATCATATTCTGTGGTTCCGGCACAACCGCAGCCATCAAGAGGCTCCAAGAAGTAATGGGAATCGCAGTGCCCTCGATTTTGAGGGAAAGGGTGGTAAAGAGCCTTGGCAAAGAAGAAAGATGGGTGGTGTTTGTTGGGCCCCATGAGCATCATTCAAACCTCCTTTCATGGCGGCAAAGCTTGGCTGAAGTGGTTGAGATTGGTCTTGATGATGAAGGCTTGTTGGACATGGATGCCCTGAAGCTACAGCTTGAGGCCTATAAAAATACCAACAGACCATTGTTGGGATCTTTTTCAGCTTGTAGCAATGTCACCGGGATACACTCCGACACGCGAGCCATTGCTCGTCTTCTTCATCGGTACAACTGCTTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATACGTGGAGATTGACATGAGATCAGGGCATAGTGATGGGTATGATGCTGTGTTCCTGAGTCCGCATAAGTTTCTTGGTGGTCCTGACTCCCCTGGTGTGCTCCTCATGAACAAGGTCCTTTACCGTATAGGATCTTCACCTCCCTCCACTTGTGGAGGTGGAACTGTTACCTATGTCAATGCCTTCAATGAAAAGGATACATTATACTTGGAGAACATAGAAGAAAGAGAGAGTGGAGGTACCCCTCCAATAATCCAGACAGTTAGAGCAGCCTTGGCATTTTGGGTGAAAGAATACATTGGCTATGAAGAGATTGAGAAAAGAGAACAGTTGTACATTAACAAGGCACTTAAGAGGCTTATCCCCAATCCCAACATTGAGGTTCTAGGGAACACAAGTACCAAGAGACAAGCTATATTGTCATTTCTCATCTACACTAACACCAATTCTTATTCCCAAGAACATGATGAACTTAACTTGTGGGCAGAAACAGGATGCAAAAGAGGCTTGCCACTTCATGGCCCTTTCGTTGCAGCATTGCTCAATGATCTTTTCGGCATCCAAGCTCGTGGTGGTTGCGCTTGTGCTGGTCCTTACGGCCATGAGTTGCTCCATATCAGCAAATCTCAATCACTTTCTATTAGATCAGCTGTTCAAAAGGGCTATGTTGGAGTGAAACCTGGATGGACCCGTGTTAGTTTCCCTTATTACATGAATGAAGAGGATTTTGAATACATTCTAAGTGCCATTGAATTTTTAGCTGTATATGGCCAAAGGTTCCTTCCTTTGTATAGCTTCAACTTGAGAAATGGCAGCTGGAGAATGAAGACAGAGGAATTTGAGGAAAAAACCAAGAAAAGCAATGGCAAGTTCCCTACTAAATTGTTGGGAAAAACTCCAGAAGAAAGAAAGAACCAATCATACTTTGACGTTGCTAAATCCATTGCCAGTGATCTCCCAAAGTTCCCTTCCGAGGGGATACTCAGTTTAAATGTGGATCCCAATGTTCTATGCTTTAGAATTTGA 1944 0.4378 MLRYVNKIIHHIIHLFLMEIEPILLAEPCIVQSKRSKVVEDNSKVVVLSKTSVLSETSQDFCNHSESFEKLVRIGLPCNDSVEEKLCWLRSQMIGNDAEFDSPFGRRKLVYADHTASGRSLHFNENFITDHLLPFYGNTHTCDSYVGSRTTKMLHEATTYIKSCLGGGEEDTIIFCGSGTTAAIKRLQEVMGIAVPSILRERVVKSLGKEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDEGLLDMDALKLQLEAYKNTNRPLLGSFSACSNVTGIHSDTRAIARLLHRYNCFACFDFAASGPYVEIDMRSGHSDGYDAVFLSPHKFLGGPDSPGVLLMNKVLYRIGSSPPSTCGGGTVTYVNAFNEKDTLYLENIEERESGGTPPIIQTVRAALAFWVKEYIGYEEIEKREQLYINKALKRLIPNPNIEVLGNTSTKRQAILSFLIYTNTNSYSQEHDELNLWAETGCKRGLPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLHISKSQSLSIRSAVQKGYVGVKPGWTRVSFPYYMNEEDFEYILSAIEFLAVYGQRFLPLYSFNLRNGSWRMKTEEFEEKTKKSNGKFPTKLLGKTPEERKNQSYFDVAKSIASDLPKFPSEGILSLNVDPNVLCFRI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03478 647 PANTHER CYSTEINE DESULFURASE 40 590 - -
Aip03g03478 647 PANTHER - 40 590 - -
Aip03g03478 647 Gene3D - 128 356 IPR015421 GO:0003824
Aip03g03478 647 Gene3D Aspartate Aminotransferase, domain 1 384 562 IPR015422 GO:0003824
Aip03g03478 647 Pfam Aminotransferase class-V 130 550 IPR000192 -
Aip03g03478 647 SUPERFAMILY PLP-dependent transferases 103 557 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03478 Aip-Chr3 113596040 113598727 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03478 - - gmx:100778947 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03478 03 113596040 113598727 Aip03g03478 03 113596040 113598727 ECH