Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03475 ATGGACTACTTGTCGTCCCGTAGAGACCGGAAGCTCGTTTCCCGGCGGCGGACGTGGTGCTGCTCATTTACCACCCCTCCGGCGAGCCCCGAAAACTCTTCATTCTCTCACACCAAATCGCCCCGCAACAAAACCGAAACGCTCTCATCATTATCGAAGCACACCACGCTCGCCTACCGCCCCAAATTGTCGTCCCGTAGAGACCGGAAGCTCGTTTCCCGGCGGCGGACGTGGGTCTCTCCCATCGACTCCGATCCTGCCGTCACGATTGAGCCCGAACCTGGACTACGATCCGCAAGCTTCCGTGCTCCCACTGCGCCGAGTTTCCGGTCGTCGCCGCCGGAGATTTTGGGCTCAGGTTCCAGTTCCAGTTCTGTTGAAGGAGTCAACAAGAATGGCTTTGATGTGAGATTGACTTTGAGAGGGAAGAGAGGAAGTTGCATGGTTCTGGAGGTTGATTCGGGAGTTCTGAGCGCGAACTCGGAGGTTTTTGCGGATTTGGTTGGCGATTACAAGAAGGGTTTGTCGCTGAAGAATTCGAGTGAAGCACCCAAGATGTGTAGAATGGAGGTTCCTGCAGTTGAGAACTTAGGTGTTTTCAGAGACACCATCGAGCTTATGTTCGAAGATGACGATGATGTCACAAAGAAGCTCATCAAGGTTGGAGTCTATCGATCCATTGACATTTTGGAGGTTTCGGCAGGCATCATGTTCAACAAGGGGGTTTTGTCCTGTTTGAAATACCTTGAGGCTGTTCCTTGGACGGAGGAGGAAGAGGAGAAATTGAGAAGCCTCTTCACAAGATTTAAGTTTGATGATGCAACTGCAAGAGACATTCTAGCAAGACTGTACTTGCATGATTCAACGGATTCCCAATTCCTGCCAAATATAGCGCGGCAACTAGTTTGGTCTATCAGCACTTGTGAGGATGCCAATGCAAGAATTGAACTCAAGTCTCTGATGAAGGGTCTTCTGTGTAAAAGCTCGGTCTATGGGAAGAACCATCTTGACATCAGCAAGGAGGATCTCTATGCTGTTTGCCGCTCATGTCTGGCTTCACTTGTTAGCCTCTTTGAGGAGACGTCTGACACAATCCCTCCCAGAAGTTTCTTGGTAAAAAAAGATTCGAGCAAGACTTTGATTGAGCGAATCTCAAGACAAGTCGATAACATCAACTGGTTGCTAGAAATTATGCTTGATGGGCAAGTAGCAGATGACTTTGTGAATATATGGGCAGATCAGCAGCAACTTGTTGGAATGCATGAAAATGCATCCCCCATGATCAGATACGAACTCAGCCGAGTGTCGGCGATTCTGATTATTGCCATGGCTACAAGAAAACTACAATGCAGGTTGGAAGCGAGATCAGGACTTCTCCAATCATGGTTTAGGCCTATGCTGTTGGACTTTGGTTGGTTACAGAGATGCAGGAAAGGACTTGACATGAAGGCCATGGAGGAGGCTATGGGACAGACACTTCTTACGTTACCTTTGAAGCAACAACATGTGCTGTTTATGGTTTGGTTTAGGTATTTCTCAAGTCATGGCACTGAATGTCCAAATCTAAGCAAGGCATTCCAAATATGGTGGCGCAGATCATTTTTAAGAGGCTGTGAAACTTATGCCATTGAATCAAGATGA 1641 0.4796 MDYLSSRRDRKLVSRRRTWCCSFTTPPASPENSSFSHTKSPRNKTETLSSLSKHTTLAYRPKLSSRRDRKLVSRRRTWVSPIDSDPAVTIEPEPGLRSASFRAPTAPSFRSSPPEILGSGSSSSSVEGVNKNGFDVRLTLRGKRGSCMVLEVDSGVLSANSEVFADLVGDYKKGLSLKNSSEAPKMCRMEVPAVENLGVFRDTIELMFEDDDDVTKKLIKVGVYRSIDILEVSAGIMFNKGVLSCLKYLEAVPWTEEEEEKLRSLFTRFKFDDATARDILARLYLHDSTDSQFLPNIARQLVWSISTCEDANARIELKSLMKGLLCKSSVYGKNHLDISKEDLYAVCRSCLASLVSLFEETSDTIPPRSFLVKKDSSKTLIERISRQVDNINWLLEIMLDGQVADDFVNIWADQQQLVGMHENASPMIRYELSRVSAILIIAMATRKLQCRLEARSGLLQSWFRPMLLDFGWLQRCRKGLDMKAMEEAMGQTLLTLPLKQQHVLFMVWFRYFSSHGTECPNLSKAFQIWWRRSFLRGCETYAIESR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03475 546 PANTHER OS04G0278000 PROTEIN 7 546 - -
Aip03g03475 546 MobiDBLite consensus disorder prediction 84 128 - -
Aip03g03475 546 MobiDBLite consensus disorder prediction 26 53 - -
Aip03g03475 546 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 7 546 IPR038920 -
Aip03g03475 546 MobiDBLite consensus disorder prediction 104 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03475 Aip-Chr3 113523170 113526584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03475 - - aip:107633608 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03475 03 113523170 113526584 Aip03g03475 03 113523170 113526584 ECH
Aip03g03475 03 113523170 113526584 Aip10g02358 10 106832241 106834952 PCT