Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03456 ATGTTTTACCAGAGTTTGATTTCAGTTATTGTTGTTTCTGTACTCAACCTTCTAGGCTTAGTTTCAACTGAGCCACTAACTTGGAGACTGGTTAAAGTTAGGTTGCCAGTGAATGTTATGTTTGTAGGAATGCTCGTCACTAGCATGTTTAGTTTGAAGTACATTAATGTAGCTATGGTAACAATATTGAAGAATGTTACTATTGTCATGACTGTCCTTGGTGAAACATATTTGTTCAAGAAGCACCACGATAGTAGAGTCTGGACTGCTTTGTCTCTAATGATCCTTTCAGCAATAACTGGAGGGATTACTGATCTTTCTTTTCATGCTACTGGCTATGCTTGGCAAATACTTAACTGTTTCTTAACTGCATCATATTCTGTGACTATAGACCTTTTGAGATTTGGGGGTAAGCTTTGGTTCAATGGGAGGCATAGTCTTGTGAATTGGTTGGTGGTCATGGGTTCTAGTGGCAGAAGCTGCCCCTCCTAA 492 0.3923 MFYQSLISVIVVSVLNLLGLVSTEPLTWRLVKVRLPVNVMFVGMLVTSMFSLKYINVAMVTILKNVTIVMTVLGETYLFKKHHDSRVWTALSLMILSAITGGITDLSFHATGYAWQILNCFLTASYSVTIDLLRFGGKLWFNGRHSLVNWLVVMGSSGRSCPS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03456 163 PANTHER GDP-MANNOSE TRANSPORTER 1-RELATED 1 131 IPR038736 GO:0005458
Aip03g03456 163 SUPERFAMILY Multidrug resistance efflux transporter EmrE 12 99 - -
Aip03g03456 163 PANTHER SOLUTE CARRIER FAMILY 35 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03456 Aip-Chr3 112977962 112979158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03456 1 130 Organic Solute Cotransporters AT2G13650 72.308 4.72e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03456 K15356 - mnt:21403593 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03456 03 112977962 112979158 Aip03g03456 03 112977962 112979158 ECH