Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03440 ATGGCAACGACGACGCTGTTCACCCTCCATCTCTGTCGTTTTGGCCAAAGCTTCTCCAAAAAACTATTCTCTACGTCCCCTTCTTCTGACACTCTTCTGAACCCTCACCACGTCACGTTCCACCACAAATTACGCCGCCCAAACTCCTCCTCTGTCCCCGCTTTCTTCCGGCGCTTCTCAGCTGTCGCAGCTGCTTCCACTTCCGGAGAGGCGAATTACGATGGAATTGGAACAGCTGATGAAAAATATGATGTGATTGTGGTTGGAGGAGGGCACGCAGGTTGTGAAGCCGCACTTGCCTCTGCGCGTTTGGGTGCAAGAACTCTTCTTCTTACTCTCAACATTGACCGTATTGCCTGGCAGCCTTGCAATCCAGCTGTTGGTGGACCTGCGAAGTCTCAATTGGTTCACGAAGTGGATGCGCTAGGTGGTGAAATAGGGAAGATTGCTGACAGATGTTACTTGCAGAAGCGGGTGCTTAATGTATCCAGAGGACCTGCAGTTCGTGCATTACGTGCTCAAACTGATAAAAGGGAATATGCCATGCAAATGAAAAGTGTAGTAGAAAGCACACCAAACCTTTCAATCAGAGAGGCTATGGTCACAGATATATTACTTGGGAAAAATGATAATGTGGAAGGTGTTTGTACATTTTTTGGGATGAAATTCTATGCTCCATCTGTTGTTCTCACAACAGGAACTTTTATGAGTGGCAAAATCTGGGTTGGTAGAACTTCCATGCCTGCAGGAAGAGCTGGCGAGTCTGCTTCTCATGGATTAACTGAGAACTTACAGCGTCTTGGTTTTGAAACTGATCGGCTGAAAACCGGAACCCCTGCCCGAGTGGACATTCGTACTGTAGATTTCTCAGGTTTAGAGCCTCAGCATGGAGACAAAGAGGTCAGCTGGTTTAGTTTTGATCCTGATGTCCATATTGAAAGAGAACAGATGTGCTGCTACCTAACCCGTACTACAGGTAGAACTCACCAGATAATAAGAGATAACTTACATGAAACACCAACTTATGGAGGATGGGTTGAAGCTAAAGGACCAAGATATTGTCCTTCCATTGAAGATAAGATTGTAAGGTTCCAAGATAAAGAGTCTCATCAAATATTTCTTGAACCAGAGGGTCGCAGTGTGCCTGAGCTCTATGTGCAGGGGTTCTCAACAGGTTTGCCAGAGAGATTACAACTACCTTTGCTCAGAACTTTGCCTGGACTTGAGAACTGTTCAATGTTGAGGCCTGCATATGCTGTAGAGTATGATTATTTACCTGCTCATCAATGTGCTAGGTCTCTTATGACAAAGAAAATACAAGGATTATTCTTCTCTGGTCAGATAAATGGAACTACTGGCTATGAGGAAGCTGCAGCACAGGGCATAATTTCTGGCATCAATGCGGCTAGATATGCTGATGGTAAGCAACTCATTGTCCTTGAAAGAGAGAGCAGCTATATAGGAACATTAATTGATGACCTAGTTACCAAGGATCTGCGAGAACCTTATCGCATGTTAACAAGCCGCTCAGAGCATCGGTTACTCTTGAGATCTGATAATGCTGATAGCCGTCTCACCCCCTTGGCTCATGAAATTGGGTTGATAGATGATAGACGGTGGAAACTGTACCAGGAGAAACAGGCTCGAATTTCTGAGGAAAAGAAGCGATTGAGAAGTGTCAGAATTTCAGGGGGAGACTTGGCTGCTGAAGTTTCTCGAGTCTCCGGTCAGCCAGTGAGGGACTCTTCAACATTGGAAAGTCTTCTTAAGAAACCACACATGCAATATGGAATTCTTGATGAGCATGGCTTTGGTAACATAGAGTTATCTAGAATAGAGAAAGAATGTGTTGAGATCGATATTAAGTACGAAGGTTTCATCTTGCGTCAGCAAAGCCAGCTTCAACAGATGGTTACTCAACAGCATAGACAACTTCCCGAAGACTTGGATTACCATATGATTACAACGTTATCTATTGAAGCACGGGAAAAGCTTTCCAAGGTTAGGCCGCAAACCATTGGTCAGGCAAGCAGAGTTGGTGGAGTGAGCCCTGCTGACATTACTGCTCTACTAATTGTGCTTGAAGCTAATCGGAGGAAAGCTCAGGAACAAAGCAGGTACAAAATAATGAATGCTATGCGAGCAAAAGCCCTGGAGGAGGAGGTGCCTGAAGTTTCTTGCACCGAAACAGTCAGCTCTTGA 2202 0.451 MATTTLFTLHLCRFGQSFSKKLFSTSPSSDTLLNPHHVTFHHKLRRPNSSSVPAFFRRFSAVAAASTSGEANYDGIGTADEKYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKIADRCYLQKRVLNVSRGPAVRALRAQTDKREYAMQMKSVVESTPNLSIREAMVTDILLGKNDNVEGVCTFFGMKFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPARVDIRTVDFSGLEPQHGDKEVSWFSFDPDVHIEREQMCCYLTRTTGRTHQIIRDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKESHQIFLEPEGRSVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCARSLMTKKIQGLFFSGQINGTTGYEEAAAQGIISGINAARYADGKQLIVLERESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLAHEIGLIDDRRWKLYQEKQARISEEKKRLRSVRISGGDLAAEVSRVSGQPVRDSSTLESLLKKPHMQYGILDEHGFGNIELSRIEKECVEIDIKYEGFILRQQSQLQQMVTQQHRQLPEDLDYHMITTLSIEAREKLSKVRPQTIGQASRVGGVSPADITALLIVLEANRRKAQEQSRYKIMNAMRAKALEEEVPEVSCTETVSS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03440 733 PRINTS Pyridine nucleotide disulphide reductase class-I signature 84 106 - -
Aip03g03440 733 PRINTS Pyridine nucleotide disulphide reductase class-I signature 228 237 - -
Aip03g03440 733 ProSitePatterns Glucose inhibited division protein A family signature 1. 350 364 IPR020595 -
Aip03g03440 733 PANTHER GLUCOSE INHIBITED DIVISION PROTEIN A 67 701 IPR002218 GO:0008033|GO:0050660
Aip03g03440 733 TIGRFAM gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 83 696 IPR004416 GO:0002098
Aip03g03440 733 Pfam tRNA modifying enzyme MnmG/GidA C-terminal domain 479 691 IPR026904 -
Aip03g03440 733 SUPERFAMILY FAD/NAD(P)-binding domain 81 337 IPR036188 -
Aip03g03440 733 SMART GIDA_assoc_3_2 621 692 - -
Aip03g03440 733 Pfam Glucose inhibited division protein A 84 475 IPR040131 -
Aip03g03440 733 Gene3D - 536 625 - -
Aip03g03440 733 Gene3D - 644 695 IPR044920 -
Aip03g03440 733 Hamap tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 81 699 IPR004416 GO:0002098
Aip03g03440 733 Gene3D - 391 535 IPR036188 -
Aip03g03440 733 Gene3D - 76 306 IPR036188 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03440 K03495 - gmx:100791841 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03440 03 112434022 112441041 Aip03g03440 03 112434022 112441041 ECH