Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03381 ATGGCAGCTGAGCGAGTTAATGCTGCAACAAGTCAGAAACTGACTGAAACTGACTGGATGAAAAATATTGAAATCTGTGAATTAGTTGCTCATGATCAAAGGCAAGCTAGAGATGTTGTTAAGGCCATAAAAAAGAGACTAGGCAACAAGAACCCCAATACACAACTTTATGCAGTTATGTTGTTGGAAATGTTGATGAACAACATTGGAGATCCAATTCATAAACAGGTTGTTGAAACAGGAACCATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCAGATTTGCCTGTAAGGGAACGGATATTTCTCCTGCTAGATGCTACACAAACAGCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAATATTATAATGCATATTATGAGTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGGTCTCAGGAATTCCAATCAAATTGTCCAAGTTCACAACCTAACAGGACTAATAATGGACCAAACAGGGAACAGGCCTTGCCTAGATCTGGTGGGGTTGCTCAGCAAGCGGAGTCCGATCCTGTTCCCGAATCTAGCATTATTCAGAAGGCTAGCAATGCATTAGAAGTTCTAAAAGAAGTCCTTGATGCTGTTGATGCGCAACATCCTCAGGGAGCAAGGGATGAATTCACCCTTGATCTTGTCGAGCAATGTTCGTTTCAAAAACAGAGAGTAATGCATCTTGTGATGGCTTCTCGTGATGAGAGGATTGTTTCACAAGCAATAGAATTAAACGAGCAGCTTCAGGAAGTACTTGCAAGGCATGATGACCTCGTTTCTGGCAGAGCCACAACTCCCAATCACTTTGTCCATGAAGAAGTAGAAGAGGAGGAGGAACCTGAGCAGTTATTCCGAAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAGAGACTGAACCTCGTTTCCCTAACTGGGGTTTGCTTGAAGAGAGACTCAACCGTGCACTAATAAGACCGCTCTCTTTGGAGCCATCTCGACAAACCAACGCCCGTGCTGCACCTGTTGTGGTTCCACCTCCAAATGCAAGGAACAATGGGGAGCTTCCTCATGTAGCAATTCCACCACCACCTGCGAAGCACTTTGAAAGGGAGAGATATTTTCAGGAGAACAAGAAGAATGGTGCTACTTTGGCCAGTCACTTGAGGGGCCTCTCCTTGCATAGTTACAATGGCAGCAGCTCTCACAGTGGAAGCTTCGATTCTAGTGATTAA 1239 0.4431 MAAERVNAATSQKLTETDWMKNIEICELVAHDQRQARDVVKAIKKRLGNKNPNTQLYAVMLLEMLMNNIGDPIHKQVVETGTIPILVKIVKKKSDLPVRERIFLLLDATQTALGGASGKFPQYYNAYYELVSAGVQFPQRSQEFQSNCPSSQPNRTNNGPNREQALPRSGGVAQQAESDPVPESSIIQKASNALEVLKEVLDAVDAQHPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSQAIELNEQLQEVLARHDDLVSGRATTPNHFVHEEVEEEEEPEQLFRRLRKGKACARPEDEETEPRFPNWGLLEERLNRALIRPLSLEPSRQTNARAAPVVVPPPNARNNGELPHVAIPPPPAKHFERERYFQENKKNGATLASHLRGLSLHSYNGSSSHSGSFDSSD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03381 412 Pfam VHS domain 5 112 IPR002014 GO:0035091|GO:0043130
Aip03g03381 412 PANTHER TOM1-LIKE PROTEIN 1 412 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aip03g03381 412 Gene3D - 2 136 IPR008942 -
Aip03g03381 412 Coils Coil 187 207 - -
Aip03g03381 412 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Aip03g03381 412 SUPERFAMILY GAT-like domain 142 268 - -
Aip03g03381 412 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 412 - -
Aip03g03381 412 CDD VHS 2 130 - -
Aip03g03381 412 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Aip03g03381 412 MobiDBLite consensus disorder prediction 141 164 - -
Aip03g03381 412 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Aip03g03381 412 MobiDBLite consensus disorder prediction 141 184 - -
Aip03g03381 412 CDD GAT_GGA_like_plant 186 264 - -
Aip03g03381 412 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Aip03g03381 412 Gene3D - 183 273 IPR038425 -
Aip03g03381 412 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03381 Aip-Chr3 110816133 110820774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03381 - - gmx:100802949 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03381 03 110816133 110820774 Aip03g03381 03 110816133 110820774 ECH
Aip03g03381 03 110816133 110820774 Aip08g03232 08 123161295 123166025 PCT