Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03217 ATGCAAGCATTTAATTCCTTGGTTGCAGTACACCACTCTTTACCCATACTCTGGCTTTATTTCATGCTCCACCAAGTTGACTTGACTTACTTGAGTCGAGTCTTGAGTGACTTGATCATATTAACGGGTCACTATTCTATAGCATCTGCAGTTCTGCTCTTAAAGTTGTCACTACCTCAAATCTCCTTCAAACCAGAAACCTTTGATTATGATGAACAACCTCAAAGATTCCGTACAACCATCAAAGAGAAAGATCTGAATCCTGTTTGGAATGAAAGCTTCTACTTCAACATCTCCGACCCTTCCATTCTTCACCACCTGACCCTTGATGCCTATGTCTACAACCAAGTCAGAGCCACAAACTCCACTTCATTTCTTGGCAAGGTTAGCCTCACTGGCACTTCTTTTGTCCCTTACTCCGATGCTGTTGTACTGCACTATCCACTGGAAAAGCGCGGCATTTTTTCTCGTGTTAGAGGAGAACTTGGCCTCAAAGTTTACATCACCAACGATCAAGCCATAAAATCCTCAATTCCAGTTGCTGCTCCGGCCGAGTCTGTAACAACAAATAATCATGCAGCACAAGTTCATGGACATGCAGATTCTGTGGTGATGAACAATGTATCATCTAGAGAAAAGGTGCACACATTTCATCATCTACCTAATCCAAACCATAACCAACACCAACATCAGCACCAAAACGAACATCAACATCATTCCTCTGCCTATGCAGATAAACATTATGTACCAAAGCATGAAGCTGATGCAATAAAATCTGAAGCACAACCACCAAAACTAGTCCTAATGCGCGCTTCGTCGGTTCAACCTGTTGATTACGCCCTCAAAGAAACAAGTCCATATCTTGGTGGGGGAAGAGTTGTTGGAGGCCGTGTTATTCACAAGGACAAGACATCAAGCACTTATGATCTTGTGGAAAGGATGTATTTTCTCTATGTAAGGGTAGTCAAGGCCCGCGAGCTTCCTTCCATGGATGTCACTGGTAGCCTTGATCCATTTGTTGAGGTCAGAATTGGAAACTACAGAGGAATTACAAAACACTATGACAAGAATCAGAATCCAGAATGGAATCAGGTATTTGCATTCTCAAAGGAGAGGATGCAGGCATCTGTAATGGAAGTTGTGATCAAAGACAAGAATCTTGTGATGAAAGATGACTTTGTAGGGATTTTGAGGTTTGATATCAATGAAGTTCCATTGAGAGTTCCACCAGATAGTCCTCTGGCGCCGCAATGGTACAGATTAGAGGACAAGAAAGGGGATAAGGTGAAGGGGGAGTTGATGCTTGCTGTGTGGATTGGAACACAAGCAGATGAGGCTTTCTGTGATGCATGGCATTCAGATGCAGCTGCTAGCTCTGTTGACACCACACCTTCTTCGACCGCAGTGCTGCGGTCGAAGGTTTACCATGCGCCAAGGCTATGGTACGTGCGCGTCAACATTGTTGAGGCGCAAGATCTAGTTCCTACGGAGAAAAACAGATTCCCTGACGTGTGCGTCAAGGCACAAATAGGACACCAAGTATTGAAAACAAAGAGAGTTCCAGCGAGGACTCTGAGTTCACTCTGGAATGAGGATCTTGTGTTTGTTGCGGCCGAGCCTTTCGATGATCATCTAGTCCTGACGGTGGAAGATCGAATCGAGCCAGGAAAAGATGAGATCATTGGCAGGGTGATCATTCCACTGAACTCTATAGAGAGGCGTGCAGATGACAGAATCATTCATTCAAGATGGTTCAATTTGGAAAAACCAATTGCTGTGGACATTGATCAGTTAAAGAAAGAGAAATTCTGTAGCAGGATTCACCTCCGTGTGTGCCTTGATGGAGGCTACCATGTTCTTGATGAATCAACACATTACAGCAGCGATCTCCGTCCAACTGCAAAGCAATTATGGCGGCCACCGATCGGTGTTCTTGAGCTTGGAGTGTTGAATGCTGTTGGACTCCACCCTATGAAAACAAGAGATGGAAGAGGCACTTCTGACACTTACTGCGTTGCAAAATATGGACATAAATGGGTCAGAACAAGAACAATTGTTGATAATTTGTGCCCTAAATACAACGAGCAATACACATGGGAGGTTTTCGATCCGGCAACGGTTCTAACTGTAGGTGTATTTGACAATAGCCAAATTGGGGAAAAAGGTTCTTCAAAAGACTTGAAAATTGGAAAAGTCAGAATCCGAATTTCGACTTTAGAAACAGGTAGAATCTACACACATTCATATCCGCTTCTAGTTCTTCACCCTACAGGGGTTAAGAAAATGGGTGAATTGCACTTGGCCATAAGATTCTCATGCACCTCTTTCACGAACATGATGCTCATGACGGTATTCTCAGGTTTATTCGCCGTTGGAAAATGGTTCTCTGATATCTGCATGTGGAAGAACGTTATAACCACTGTGTTAGTTCATGTCCTCTTCTTGATGCTGGTGTGCTTCCCGGAACTGATTTTACCAACGGTTTTTCTGTACATGTTCTTGATTGGTGTGTGGAACTATAGGTATAGGCCAAGGTACCCGCCACACATGAACACGATCATTTCGCAGGCGCACACGGTGCAACCGGATGAGTTGGATGAAGAGTTCGATACGTTTCCTACGAGCCGGAACCCTGATCTTGTGAGAATGAGGTATGATAGGTTGAGGAGTGTGGGTGGGAGGATTCAGACGGTGGTTGGTGATTTGGCCAGCCAGGGTGAGAGGATTCAGGCGCTGTTGAATTGGAGGGACCCACGTGCGACGGTTATATTCGTTGTGTTTTGTCTTCTTGCTGCGGTGGTTTTGTATGTTACTCCGTTTCAGGTGGTGGCTGCTTTGGCTGGCTTCTATGTTATGAGGCATCCCAGGTTCCGGCATAGGCTTCCGTCGGCGCCTATCAACTTCTTCCGACGGTTGCCCGCAAGAACAGATAGCATGTTGTAA 2943 0.4485 MQAFNSLVAVHHSLPILWLYFMLHQVDLTYLSRVLSDLIILTGHYSIASAVLLLKLSLPQISFKPETFDYDEQPQRFRTTIKEKDLNPVWNESFYFNISDPSILHHLTLDAYVYNQVRATNSTSFLGKVSLTGTSFVPYSDAVVLHYPLEKRGIFSRVRGELGLKVYITNDQAIKSSIPVAAPAESVTTNNHAAQVHGHADSVVMNNVSSREKVHTFHHLPNPNHNQHQHQHQNEHQHHSSAYADKHYVPKHEADAIKSEAQPPKLVLMRASSVQPVDYALKETSPYLGGGRVVGGRVIHKDKTSSTYDLVERMYFLYVRVVKARELPSMDVTGSLDPFVEVRIGNYRGITKHYDKNQNPEWNQVFAFSKERMQASVMEVVIKDKNLVMKDDFVGILRFDINEVPLRVPPDSPLAPQWYRLEDKKGDKVKGELMLAVWIGTQADEAFCDAWHSDAAASSVDTTPSSTAVLRSKVYHAPRLWYVRVNIVEAQDLVPTEKNRFPDVCVKAQIGHQVLKTKRVPARTLSSLWNEDLVFVAAEPFDDHLVLTVEDRIEPGKDEIIGRVIIPLNSIERRADDRIIHSRWFNLEKPIAVDIDQLKKEKFCSRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWRPPIGVLELGVLNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTIVDNLCPKYNEQYTWEVFDPATVLTVGVFDNSQIGEKGSSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFTNMMLMTVFSGLFAVGKWFSDICMWKNVITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNYRYRPRYPPHMNTIISQAHTVQPDELDEEFDTFPTSRNPDLVRMRYDRLRSVGGRIQTVVGDLASQGERIQALLNWRDPRATVIFVVFCLLAAVVLYVTPFQVVAALAGFYVMRHPRFRHRLPSAPINFFRRLPARTDSML 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03217 980 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 315 454 IPR035892 -
Aip03g03217 980 SMART C2_3c 644 748 IPR000008 -
Aip03g03217 980 SMART C2_3c 42 145 IPR000008 -
Aip03g03217 980 SMART C2_3c 316 413 IPR000008 -
Aip03g03217 980 SMART C2_3c 482 580 IPR000008 -
Aip03g03217 980 CDD C2D_MCTP_PRT_plant 644 768 - -
Aip03g03217 980 Gene3D C2 domain 640 775 IPR035892 -
Aip03g03217 980 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 74 781 - -
Aip03g03217 980 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 781 980 - -
Aip03g03217 980 ProSiteProfiles C2 domain profile. 298 419 IPR000008 -
Aip03g03217 980 ProSiteProfiles C2 domain profile. 461 585 IPR000008 -
Aip03g03217 980 ProSiteProfiles C2 domain profile. 626 749 IPR000008 -
Aip03g03217 980 Pfam C2 domain 317 419 IPR000008 -
Aip03g03217 980 Pfam C2 domain 481 575 IPR000008 -
Aip03g03217 980 Pfam C2 domain 644 751 IPR000008 -
Aip03g03217 980 Pfam C2 domain 72 132 IPR000008 -
Aip03g03217 980 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 74 781 - -
Aip03g03217 980 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 781 980 - -
Aip03g03217 980 Gene3D C2 domain 298 439 IPR035892 -
Aip03g03217 980 Gene3D C2 domain 464 613 IPR035892 -
Aip03g03217 980 Pfam Plant phosphoribosyltransferase C-terminal 825 980 IPR013583 -
Aip03g03217 980 Gene3D C2 domain 61 199 IPR035892 -
Aip03g03217 980 MobiDBLite consensus disorder prediction 222 242 - -
Aip03g03217 980 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 73 174 IPR035892 -
Aip03g03217 980 CDD C2C_MCTP_PRT_plant 482 632 - -
Aip03g03217 980 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 481 634 IPR035892 -
Aip03g03217 980 ProSiteProfiles C2 domain profile. 24 147 IPR000008 -
Aip03g03217 980 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 643 777 IPR035892 -
Aip03g03217 980 CDD C2B_MCTP_PRT_plant 316 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03217 Aip-Chr3 104904942 104909973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03217 276 980 Lipid Metabolism Gene Families AT3G57880 60.591 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03217 - - gmx:100777951 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03217 03 104904942 104909973 Aip03g03217 03 104904942 104909973 ECH