Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03197 ATGGACCCTAAAGAGGTGAAATCGGAGCTGGTGCTCATCCTAGACTATGGTTCCCAATACACACACCTCATCACTCGCCGAATCAGAAGCCTCTCCGTCTTCTCCCTCTGCATCTCGGGCACCTCCTCTCTCTCCGCCATCACTGCTCTCAACCCCTCCGTCGTCATCCTCTCCGGCGGGCCTCACTCCGTCCACACCCCGGACTCCCCATCCTTCCCCGATGGCTTCCTCGACTGGGCCCAGTCAAACGGCGTCGTCCTCCTCGGCATCTGCTACGGCCTCCAGCTCCTCGTTCAGCGCCTCGGCGGCGAGGTCCGCGTCGGCCATACGCAGGAGTACGGCCGCATGGAGATCCACGTTGACAAGCCGTCTGACCTCTTCGGCAATGATAGAGTCGGCAGCAAGCAGGTTGTCTGGATGAGCCACGGCGACGAGGCCGCCGTCCTCCCCCCTGGCTTCCAAGTTGTCGCACGCAGCCAGCAGGGCGCAGTCGCCGCCATTGAGAATCCTTCTAGAAAGTTCTATGGCCTTCAGTATCACCCTGAGGTGACGCATACGCCGGAAGGGATGGAGACGTTGAAGCGCTTTCTGTTTGATGTTTGTAAAGTTGCTACAGAATGGAAGATGGAGGATGTGATGGAAGAAGAAATTAAGGTGATTAAGGAGACTGTTGGCCCTGATGAGCATGTCATATGTGCCTTGTCTGGTGGTGTGGATTCCACGGTTGCTGCTACTCTTGTGCATAAAGCCATTGGCGATCGCCTTCATTGTGTCTTTGTGGATAATGGATTGCTTAGGTATAAGGAGAGGGAACGTGTGATGGGGACATTCAAAAAGGATCTCCATTTACCAGTTGTATGTGTTGATGCTGTAGACCAATTTCTTTCGAAGCTGAAGGGTCTAGAGCAGAAACTGGGAAAGAAACCTTCTTACTTGGTTCAAGGAACCTTGTACCCTGATGTGATCGAATCCTGTCCGCCCCCTGGAAGTGGGAGAACCCATTCCCATACCATCAAGAGCCATCACAATGTCGGTGGTCTCCCAAAGGACATGAAGTTGAAGCTTATTGAACCTCTTAAACTACTATTCAAGGATGAGGTTCGTCAATTAGGGAAGATCTTAAATGTTCCTGAGGGCTTTCTAAAACGCCACCCATTCCCTGGCCCTGGTCTTGCAGTGAGAGTTTTAGGTGATGTTACAGAAGGGGATGCCTTAGAAATTCTCCGACAGGTTGATGAGATCTTCATTCAGTCAATCAAGGATGCTGGGCTTTACGATGAAATATGGCAAGCCTTTGCAGTTTTCTTGCCAATACGATCTGTTGGAGTTCAAGGTGATCAAAGAACACATTCCCATGTTGTTGCGCTCCGAGCTGTTACAAGTCAAGACGGAATGACCGCTGATTGGTACTACTTTGAGCACAAGTTCCTCGATGATGTAGCAAGAAAGATTTGTAATGGTGTGCGTGGTGTAAACCGAGTTGTGCAAGACATTACCTCAAAGCCACCATCAACAATTGAATGGGAATAA 1530 0.5085 MDPKEVKSELVLILDYGSQYTHLITRRIRSLSVFSLCISGTSSLSAITALNPSVVILSGGPHSVHTPDSPSFPDGFLDWAQSNGVVLLGICYGLQLLVQRLGGEVRVGHTQEYGRMEIHVDKPSDLFGNDRVGSKQVVWMSHGDEAAVLPPGFQVVARSQQGAVAAIENPSRKFYGLQYHPEVTHTPEGMETLKRFLFDVCKVATEWKMEDVMEEEIKVIKETVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERERVMGTFKKDLHLPVVCVDAVDQFLSKLKGLEQKLGKKPSYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGKILNVPEGFLKRHPFPGPGLAVRVLGDVTEGDALEILRQVDEIFIQSIKDAGLYDEIWQAFAVFLPIRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYYFEHKFLDDVARKICNGVRGVNRVVQDITSKPPSTIEWE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03197 509 TIGRFAM guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 509 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Aip03g03197 509 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 8 509 IPR022955 GO:0003922|GO:0006177
Aip03g03197 509 PANTHER GMP SYNTHASE (GLUTAMINE-HYDROLYZING), PUTATIVE / GLUTAMINE AMIDOTRANSFERASE, PUTATIVE-RELATED 300 509 - -
Aip03g03197 509 PANTHER GMP SYNTHASE (GLUTAMINE-HYDROLYZING), PUTATIVE / GLUTAMINE AMIDOTRANSFERASE, PUTATIVE-RELATED 2 301 - -
Aip03g03197 509 Gene3D - 4 204 IPR029062 -
Aip03g03197 509 Gene3D HUPs 208 393 IPR014729 -
Aip03g03197 509 CDD GMP_synthase_C 229 508 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Aip03g03197 509 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 207 383 IPR025777 GO:0003921|GO:0005524
Aip03g03197 509 Pfam tRNA methyl transferase HUP domain 229 281 - -
Aip03g03197 509 CDD GATase1_GMP_Synthase 11 197 IPR004739 GO:0003922|GO:0005524|GO:0006177
Aip03g03197 509 Pfam Glutamine amidotransferase class-I 13 199 IPR017926 -
Aip03g03197 509 Pfam GMP synthase C terminal domain 418 508 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Aip03g03197 509 PRINTS Anthranilate synthase component II signature 55 64 - -
Aip03g03197 509 PRINTS Anthranilate synthase component II signature 176 189 - -
Aip03g03197 509 PRINTS Anthranilate synthase component II signature 11 25 - -
Aip03g03197 509 PRINTS Anthranilate synthase component II signature 86 97 - -
Aip03g03197 509 TIGRFAM guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 203 IPR004739 GO:0003922|GO:0005524|GO:0006177
Aip03g03197 509 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 196 402 - -
Aip03g03197 509 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 388 509 - -
Aip03g03197 509 Gene3D - 394 509 - -
Aip03g03197 509 PANTHER GMP SYNTHASE-RELATED 300 509 - -
Aip03g03197 509 PANTHER GMP SYNTHASE-RELATED 2 301 - -
Aip03g03197 509 SUPERFAMILY Class I glutamine amidotransferase-like 10 237 IPR029062 -
Aip03g03197 509 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 10 206 - -
Aip03g03197 509 PRINTS Glutamine amidotransferase superfamily signature 86 97 - -
Aip03g03197 509 PRINTS Glutamine amidotransferase superfamily signature 176 189 - -
Aip03g03197 509 PRINTS Glutamine amidotransferase superfamily signature 55 64 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03197 K01951 - gmx:100794993 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03197 03 103706368 103708722 Aip03g03197 03 103706368 103708722 ECH