Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03186 ATGTGGTTTCTTGGTTGGAAAGGAGAATCTGGCTTCTCAGCCTCCTCCACGGCGGAGCAAGTCACTCAAGGCATTGATGGACACGGCCTCACCGCCATCGTCACCGGGGCTACAAGTGGCCTTGGTTTGGAGACGACGCGAGTTCTTGCACTGCGCGGTGTCCATGTTGTTATGGCTGTAAGGAATGTTGAATCTGGCACCAAGGTCAAAGAAACAATATTGAAGGAAATTCCCTCAGCTAAAATTGATGTCATGGAATTAGATCTTTGCTCTATGGCATCTGTTAGGAAGTTTGCATCAGATTATATTTCTTCTGAACGTCCACTCAATATCCTAATTAACAATGCAGGGGTGATGGCAACTCCATTCCAGCTTTCTCAAGACAACATTGAGATGCAGTTTGCAACGAATCATTTGGGTCATTTTCTCTTGACAAACCTTTTACTACAAACTATGAAAAAAACTGTACGTGAATGCAAACGGGAGGGAAGGATAGTCATTCTATCTTCGGAAGCACACAGACTTCCATATCAAGAAGGAATTCGTTTTGATAAGATCAATGATGAATCAGTGTACAACAGTTATTATGCTTATGGACAATCAAAGCTTGCTAATATTTTGCATGCCAAAGAACTTACGAGGCGCTTTAAGGAAGAAGGAGTTGAAATAACCGCTAACGCACTTCATCCAGGATCAATTATTACAAATATTCTGCGTTACCATGGTTACATTAATGCTGTTGCTAATATGGTGGGTAAATACTTACTTAAAAATGTGCAACAGGGAGCTGCCACTCAATGTTATGTAGCATTGCATCCACAAGTTAAGGGAATATCTGGTGAGTACTTTATGGACAGCAATAAGGCAACGCCAACCCATCTGGCTAACGATTCAGAGCTGGCTAAAAAACTATGGGAGTTCAGCGTAAGCCTAACTAATCAAAAGTAG 948 0.4188 MWFLGWKGESGFSASSTAEQVTQGIDGHGLTAIVTGATSGLGLETTRVLALRGVHVVMAVRNVESGTKVKETILKEIPSAKIDVMELDLCSMASVRKFASDYISSERPLNILINNAGVMATPFQLSQDNIEMQFATNHLGHFLLTNLLLQTMKKTVRECKREGRIVILSSEAHRLPYQEGIRFDKINDESVYNSYYAYGQSKLANILHAKELTRRFKEEGVEITANALHPGSIITNILRYHGYINAVANMVGKYLLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKATPTHLANDSELAKKLWEFSVSLTNQK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03186 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Aip03g03186 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Aip03g03186 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Aip03g03186 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Aip03g03186 315 PANTHER RETINOL DEHYDROGENASE 2 312 - -
Aip03g03186 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 288 IPR036291 -
Aip03g03186 315 Pfam short chain dehydrogenase 31 179 IPR002347 -
Aip03g03186 315 Gene3D - 22 315 - -
Aip03g03186 315 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 312 - -
Aip03g03186 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03186 Aip-Chr3 103143082 103146739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03186 33 291 Acyl Lipid Metabolism Gene Families AT3G55310 27.636 2.87e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03186 - K19329 gmx:100785176 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03186 03 103143082 103146739 Aip03g03186 03 103143082 103146739 ECH