Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03180 ATGAGAAGAGGTGCAAATAATAATGGTAGAGCAGTCAACAACACTATGGATACTATAAACGCTGCTGCCTCTGCCATCGCAGCTTCTGCCCAAAATCGCGCTTCTCAACCAACTCAACAGAAGAAAAAATGGGGAAGCTTGTTGAACATAGCTGGGTGCTTTGGATATCAGAGGAATCGAAAGCGTATCGGGCACGCAGTCCTTGCTCCAGAAACAGCACCTTCTCGTGCAGATCCTACTGCACCTGCTGCCGTTATCTCAACACAAGTTCCTACCATAACACTTCCCTTTGTGGCACCTCCCTCTTCACCTGCCTCTTTCTTTCAATCAGAACCGCCTTCAACCGCGCAATCTCCAGTTGGTATTGTATCCCTCACGTCTGTGTCTGCCAGTATGTACTCTCCTGGTGGCCCTGCTTCAATCTTTGCAATCGGCCCTTACGCCCACGAAACACAATTGGTTTCGCCGCCTGTTTTCTCGGCATCATCCACTGCTCCTTTCACTCCACCTCCTGAGTCTGTCCACTTGACTACGCCGTCTTCGCCTGAGGTGCCCTTTGCTCAGCTACTTGACCCACAATATAGGAATGGAGAGACCTATCAAAGGATCCAAATATCTCACTATGATTTCCAATCCTATCAGTTTCAACCAGGAAGCCCGGTTGGTCAACTCATATCACCTAGGTCCGCCATCTCAGCTTCTGGAACCTCGTCGCCATTTCCAGACACCGAGTTTCCTGCTGGTGGCTCCCATATACTTGACTTGCAAGCAGCAGACCCTTCCAAGCTTCTTAACTTGGAGAAATTTTCCGCTCATGAGAACCGCAAGTCAAAAGAAAGTTCTGGGTCTATAACACCTGATGCTGCAAGGTCCACAACTCAAGGAAATTTTCTTCCAAATCATTGGGTTTCTGAGATCAAAATGTCTCCACATCCAAGCAATAATGGCTTGAGTGAGATCAGTTTAAGCCATAGGGTATCATTTGAATTATCTGCCCAAAAAGGAATGAGATGTGTGGAAAACAAACTGCCATCACCATCATCATCAGCATGGACTAAAGTACTGTCAAAATTGAAATATGAAGCAGCAGCAACGGTAGACAAAGAAGAAAGTTGTAGAGAAACTAGGCATGTTGATGACCAAAAGGTAGCAGCAGCTGAAACTCCAAATGATGCAGCCAAACAAACCAATTTGGGTGCAGAGGATGCAATAGTTGATGAGAAGGATGAGTCCTTAACCCTTTCTTCTGGCAAGGAATTCAAATTCACCAATGCAGATGGTGCAGATTCTCATGGCCCCAATATAGTTGCTGATTGGTGGGCTAATGAGAAAGTTGCAGGCAAGGAAGGAGGGGCCTCCAAGGATTGGTCTTTTTTTCCAATGATTCAACATAGTGTGAGCTAA 1404 0.4623 MRRGANNNGRAVNNTMDTINAAASAIAASAQNRASQPTQQKKKWGSLLNIAGCFGYQRNRKRIGHAVLAPETAPSRADPTAPAAVISTQVPTITLPFVAPPSSPASFFQSEPPSTAQSPVGIVSLTSVSASMYSPGGPASIFAIGPYAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPQYRNGETYQRIQISHYDFQSYQFQPGSPVGQLISPRSAISASGTSSPFPDTEFPAGGSHILDLQAADPSKLLNLEKFSAHENRKSKESSGSITPDAARSTTQGNFLPNHWVSEIKMSPHPSNNGLSEISLSHRVSFELSAQKGMRCVENKLPSPSSSAWTKVLSKLKYEAAATVDKEESCRETRHVDDQKVAAAETPNDAAKQTNLGAEDAIVDEKDESLTLSSGKEFKFTNADGADSHGPNIVADWWANEKVAGKEGGASKDWSFFPMIQHSVS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03180 467 MobiDBLite consensus disorder prediction 371 390 - -
Aip03g03180 467 MobiDBLite consensus disorder prediction 281 296 - -
Aip03g03180 467 MobiDBLite consensus disorder prediction 224 243 - -
Aip03g03180 467 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 3 467 - -
Aip03g03180 467 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 3 467 IPR040420 -
Aip03g03180 467 MobiDBLite consensus disorder prediction 224 249 - -
Aip03g03180 467 MobiDBLite consensus disorder prediction 271 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03180 Aip-Chr3 102640897 102643677 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03180 - - adu:107479926 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03180 03 102640897 102643677 Aip03g03180 03 102640897 102643677 ECH