Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03146 ATGGGGGAGTCTGAGACTTTTGCATTCCAGGCTGAGATCAACCAACTGCTTAGCTTGATCATCAACACCTTCTACAGCAACAAGGAGATCTTCCTTCGTGAGCTCATTAGCAATGCTTCCGACGCACTGGACAAAATCAGATTCGAGAGCTTGACAGAGAAATCGAAGCTTGATGCTCAGCCTGAGCTCTTCATTAGGATTGTTCCTGATAATACAAATAAGACCCTCTCTGTTATAGACAGTGGCTCTGGCATGACCAAAGCTGAGTTGGTGAATAATCTGGGGACAATAGCGAGGTCTGGCACGAAGGAGTTCATGGAAGCACTGCAGGCGGGTGCAGATGTTAGCATGATTGGGCAATTCGGTGTTGGCTTCTACTCTGCCTATCTTGTTGCCGATAAGGTCATTGTCACCACCAAGCACAACGACGACGAGCAATATGTCTGGGAGTCTCAGGCCGGTGGATCCTTCACCGTCACTAGAGACCTCCAAGGTGAACCCCTCGGTAGAGGCACCAAGATCACCCTCTTCCTCAAAGATGATCAGTTGGAATACTTGGAGGAGAGGAGAATCAAGGATTTGGTGAAGAAGCACTCGGAATTCATCAGCTATCCTATATATCTATGGACGGAGAAGACCACGGAGAGGGAGGTGAGCGACGACGAGGACGAAGAATACTCCAAGAAGGAGAAGGAAGAGGAAGGGGATGTGGAGGAGGTGGATGAGGACAAATCAAAAGAGAAGAAGAAGAAGAAAGTGAAGGAAGTGAGGCATGAGTGGCAGCAGATTAACAAGCAGAGACCGATTTGGCTGAGGAAGGCAGAGGAAGTAACGAGGGAGGAATATGCAGCATTCTACAAGAGCCTCACCAATGACTGGGAGGACCATCTCGCAGTGAAGCACTTCTCCGTGGAAGGCCAGCTGGAGTTCAAGGCCATTCTCTTCGTTCCAAGAAGAGCACCCTTTGATCTCTTTGACACTAGAAAGAAGCTCAACAATATCAAACTCTATGTGAGGAGGGTCTTCATCATGGACAATTGTGAGGAACTCATCCCTGAGTACCTCGGTTTCGTGAAGGGCATCGTGGACTCCGATGATCTCCCACTCAACATCTCCCGCGAGACGCTTCAGCAGAACAAGATTCTCAAAGTCATCAGGAAGAATTTGGTGAAGAAATGCATTGAGATGTTCTTTGAGATTGCGGAGAACAAGGATGACTACAACAAATTCTACGATGCATTCTCCAAGAACATCAAGCTTGGGATTCATGAGGATAGCCAGAACAGAGCCAAACTGGCAGAGCTTCTTAGGTACCATTCAACCAAGAGTGGTGATGAGATGACAAGCCTCAAGGACTACGTCACCAGGATGAAGGAGGGTCAGCAGTCTATATACTACATCACCGGTGAGAGCAAGAAGGCTGTGGAGAATTCACCGTTCCTCGAGAGGCTTAAGAAGAGGGGCTATGAGGTGTTGTTCATGGTGGACGCAATTGATGAGTATGCTGTTACTCAGCTCAAGGAGTATGACGGGAAGAAGCTTGTCTCTGCAACCAAGGAAGGGCTGAAGCTGGAAGACGAGACGGAAGAAGAGAAGCAAAAGAGGGAGGAGAAGAACAAGTCATTCGAGAATCTGTGCAAGACAATGAAGGAGATTCTTGGGGACAGGGTGGAGAAGGTGGTTGTGTCTGATAGGATTGTGGACTCGCCGTGTTGCTTGGTGACGGGGGAATATGGATGGAGTGCAAACATGGAGAGGATCATGAAGGCACAGGCTCTCAGGGACAACACAATGAGCTCGTACATGAGCAGCAAGAAGACTATGGAGATCAACACTGAGAATGGGATCATGGAGGAGCTCAGGAAAAGGGCTGAGACTGACAAGAACGACAAGTCCGTCAAGGATTTGGTACTGCTCCTCTATGAGACGGCCCTGTTAACGTCCGGTTTCAGCCTCGACGATCCCAACTTGTTTGCGGCGAGGATCCACAGGATGCTCAAGTTGGGTTTGAACATCGAGGAGGGTGAGGCTGCTGAAGATGCAAACATGCCACCCCTTGAAGAGGAAGCAAACGAGGAGAGCAAGATGGAAGAGGTTGACTAA 2103 0.4888 MGESETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTEKSKLDAQPELFIRIVPDNTNKTLSVIDSGSGMTKAELVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVADKVIVTTKHNDDEQYVWESQAGGSFTVTRDLQGEPLGRGTKITLFLKDDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEREVSDDEDEEYSKKEKEEEGDVEEVDEDKSKEKKKKKVKEVRHEWQQINKQRPIWLRKAEEVTREEYAAFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFFEIAENKDDYNKFYDAFSKNIKLGIHEDSQNRAKLAELLRYHSTKSGDEMTSLKDYVTRMKEGQQSIYYITGESKKAVENSPFLERLKKRGYEVLFMVDAIDEYAVTQLKEYDGKKLVSATKEGLKLEDETEEEKQKREEKNKSFENLCKTMKEILGDRVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDNTMSSYMSSKKTMEINTENGIMEELRKRAETDKNDKSVKDLVLLLYETALLTSGFSLDDPNLFAARIHRMLKLGLNIEEGEAAEDANMPPLEEEANEESKMEEVD 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03146 700 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 699 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip03g03146 700 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 181 IPR003594 -
Aip03g03146 700 Gene3D - 3 229 IPR036890 -
Aip03g03146 700 MobiDBLite consensus disorder prediction 676 700 - -
Aip03g03146 700 CDD HATPase_Hsp90-like 14 202 - -
Aip03g03146 700 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5 213 IPR036890 -
Aip03g03146 700 Coils Coil 525 545 - -
Aip03g03146 700 PIRSF HSP90_HTPG 1 700 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip03g03146 700 PANTHER HEAT SHOCK PROTEIN 90-1 1 699 - -
Aip03g03146 700 SMART HKATPase_4 27 182 IPR003594 -
Aip03g03146 700 Pfam Hsp90 protein 184 696 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip03g03146 700 MobiDBLite consensus disorder prediction 680 700 - -
Aip03g03146 700 Gene3D - 520 671 IPR037196 -
Aip03g03146 700 SUPERFAMILY Ribosomal protein S5 domain 2-like 266 520 IPR020568 -
Aip03g03146 700 MobiDBLite consensus disorder prediction 218 248 - -
Aip03g03146 700 Hamap Chaperone protein HtpG [htpG]. 2 667 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Aip03g03146 700 Gene3D - 264 432 - -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 118 140 IPR020575 -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 5 25 IPR020575 -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 93 110 IPR020575 -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 170 187 IPR020575 -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 26 48 IPR020575 -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 75 92 IPR020575 -
Aip03g03146 700 PRINTS 90kDa heat shock protein signature 188 206 IPR020575 -
Aip03g03146 700 ProSitePatterns Heat shock hsp90 proteins family signature. 25 34 IPR019805 GO:0005524|GO:0006457|GO:0051082
Aip03g03146 700 Gene3D - 433 519 - -
Aip03g03146 700 SUPERFAMILY HSP90 C-terminal domain 544 666 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03146 Aip-Chr3 101040776 101043389 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03146 K04079 - cit:102616579 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03146 03 101040776 101043389 Aip03g03146 03 101040776 101043389 ECH