Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03139 ATGCCTTCCTCAGCAGTTCGCAGGCTCGCTATGGCAGCAGCATCCAGCTCCCTCTCACTCAAGCAGGGACTCTTACTTCGCCCTCTGCGTACCAATCCTCTCACCCGACCTCGTCCTTCTTCCACTTCCCTCCCTTCCAGAAGCTTCCGCAGATGCTACGCCGCTTTCGCCAACGAGAATCGCGAGTACGTCATCGTTGGGGGCGGAAATGCCGCGGGATATGCTGCTCGCACCTTCGTCGAACATGGCATGGCCGATGGTCGTCTTTGTATTGTCACTAAAGAGGCATATGCGCCCTACGAGCGTCCTGCACTCACAAAAGCGTATTTGTTTCCACCGGATAAGAAGCCTGCCCGCCTTCCTGGTTTTCACACCTGTGTTGGATCGGGTGGAGAAAGGCAGACTCCAGAGTGGTATCAAGAGAAGGGGATAGAGATGTTGTATCAAGATCCAGTCAAGGATATTGATATTGAAAAGCAAACTTTGATAACTAATTCTGGAAAACATCTGAAGTATGGCTCACTTATAATTGCTACAGGGAGTTCAGCCTCGAGATTTCCGGAGAAAATTGGGGGAAACCTACCTGGCGTTCATTATATCCGGGAGGTTGCAGATGCTGATGCACTGATTTCATCATTGGGAAAAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGATATATAGGAATGGAGATTGCTGCTGCAACAGTTGCTTGGAAACTTGATACAACAATCATATTTCCTGAGGATCATCTCTTGCAAAGATTGTTCACTCCTTCGCTTGCCCGGAGATACGAGGAACTCTACCAAAAGAATGGTGTCAAAATATTGAAGGGTGCCTCCATAAAAAATTTGGAAGCTGGCTCTGACGGACATGTAGCTGGTGTCAAACTTGGAGATGGATCTGTTGTAGAAGCTGATACGGTAATTGTAGGCATTGGAGCAAAACCTGCTGTGAGTCCCTTTGAGCGGGTGGGCTTGAATACAGAAGTTGGTGGATTACAGATATATAACCGTACTGCTCGAGTGGAACATGTAGATCATGCTCGTCGCTCAGCACAGCACTGTGTAAAATCATTACTCACTGCACAAACTCACACGTACGATTACCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCCCCAGAAGAGTATGGTGGCAGTTCTTCGGAGACAATGTCGGAGAAACAGTTGAAATTGGAAACTTTGATCCTAAAGTAGCTACCTTCTGGATTGAATCTGGTAAGCTAAAAGGAGTGCTGCTTGAAAGTGGGAGCCCTGAGGAATTTCAGCTCCTGCCTAAACTAGCCAGAAATCAACCCGTAATTGATAAGGCGAAGCTTCAAAGCGCATCTTCTGTTGAGGAGGCCCTAGACATTGCTTGGAGATCCTTGCAAGTTGAAGCTACAGTCTAA 1422 0.4726 MPSSAVRRLAMAAASSSLSLKQGLLLRPLRTNPLTRPRPSSTSLPSRSFRRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYQEKGIEMLYQDPVKDIDIEKQTLITNSGKHLKYGSLIIATGSSASRFPEKIGGNLPGVHYIREVADADALISSLGKAKKVVVVGGGYIGMEIAAATVAWKLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEAGSDGHVAGVKLGDGSVVEADTVIVGIGAKPAVSPFERVGLNTEVGGLQIYNRTARVEHVDHARRSAQHCVKSLLTAQTHTYDYLPYFYSRVFEYEGSPRRVWWQFFGDNVGETVEIGNFDPKVATFWIESGKLKGVLLESGSPEEFQLLPKLARNQPVIDKAKLQSASSVEEALDIAWRSLQVEATV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03139 473 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 39 472 - -
Aip03g03139 473 SUPERFAMILY FAD/NAD(P)-binding domain 59 261 IPR036188 -
Aip03g03139 473 PRINTS Pyridine nucleotide disulphide reductase class-I signature 62 84 - -
Aip03g03139 473 PRINTS Pyridine nucleotide disulphide reductase class-I signature 218 243 - -
Aip03g03139 473 PRINTS Pyridine nucleotide disulphide reductase class-I signature 306 320 - -
Aip03g03139 473 Gene3D - 64 329 IPR036188 -
Aip03g03139 473 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Aip03g03139 473 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Aip03g03139 473 PRINTS FAD-dependent pyridine nucleotide reductase signature 64 83 - -
Aip03g03139 473 PRINTS FAD-dependent pyridine nucleotide reductase signature 305 321 - -
Aip03g03139 473 Pfam Pyridine nucleotide-disulphide oxidoreductase 62 335 IPR023753 GO:0016491
Aip03g03139 473 Gene3D - 372 458 IPR016156 GO:0016491|GO:0050660
Aip03g03139 473 Gene3D - 186 313 IPR036188 -
Aip03g03139 473 PANTHER APOPTOSIS-INDUCING FACTOR 1 39 472 - -
Aip03g03139 473 SUPERFAMILY FAD/NAD(P)-binding domain 213 358 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03139 Aip-Chr3 100202872 100206896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03139 167 337 Acyl Lipid Metabolism Gene Families AT1G48030 27.225 2.05e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03139 K08232 - gmx:100819919 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03139 03 100202872 100206896 Aip03g03139 03 100202872 100206896 ECH