Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03110 ATGAGGGTGTTGTCATCAAGGTTCAAGTTTGTGTCAAGAGCAGTGGCGCACGAGGATCATGATCATAGTGAGGTGCAAAGAATAACGTACCCTACTACAGAAGGAACAAGGTTGGGGACTTGTCTAACAGTTTGGAAAAAATCCCTTGTCATTAATTGCAAAGGATTCACAGTCATCGATTCATGTGGAAATCTGGCGTACCGAGTTGACAATTACAGCGTCCACCCTCACCAACTCACTCTCATGGATGCTTCTGGAAACTCTCTCCTCACCATGCACCGCCGCCGCACGAAGCTTGGACTTGTATATAGCTGGTATGTGTACGAAGGGGAGAATGAGGGAAGAGAGAAAGAGAGTGCAGTGTGTTGTGTGAGGAAGCGTGTGAATATCTTAAAGGGCAATGGCAATCCCAGGGTTGAGGCATGCGTGTATGGTTTATTAGGTCCAGAGTCAGATAAAAAACGACATGGACATGCCGCGTTTACAGTCGAAGGTTCCTATGCAGATAGAACATGTAAGGTGTTGGATAAGTCCAAGAGTGTGGTGGCTGAAATCAAGAGAAAAGAAGCCAATTCCGAACACGTTTCTTTTGGGATAGACATTTTTCACTTAATTGTTCACCCTGGCTTTGATCCTACATTTGCCATGGCACTCCTTTTACTACTCGACCAAATGTTTTCATAA 684 0.4488 MRVLSSRFKFVSRAVAHEDHDHSEVQRITYPTTEGTRLGTCLTVWKKSLVINCKGFTVIDSCGNLAYRVDNYSVHPHQLTLMDASGNSLLTMHRRRTKLGLVYSWYVYEGENEGREKESAVCCVRKRVNILKGNGNPRVEACVYGLLGPESDKKRHGHAAFTVEGSYADRTCKVLDKSKSVVAEIKRKEANSEHVSFGIDIFHLIVHPGFDPTFAMALLLLLDQMFS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03110 227 PANTHER PROTEIN LURP-ONE-RELATED 17 16 226 - -
Aip03g03110 227 PANTHER - 16 226 IPR007612 -
Aip03g03110 227 Pfam LURP-one-related 41 220 IPR007612 -
Aip03g03110 227 Gene3D - 37 227 IPR038595 -
Aip03g03110 227 SUPERFAMILY Tubby C-terminal domain-like 40 226 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03110 Aip-Chr3 98905568 98906462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03110 - - lja:Lj0g3v0155199.1 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03110 03 98905568 98906462 Aip03g03110 03 98905568 98906462 ECH
Aip05g01103 05 15842705 15843456 Aip03g03110 03 98905568 98906462 PCT