Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03108 ATGAACGGTCATCCGAAGCACCAGCGCAGGTGGGCATCCGACACCGTTCCCGCCAGAGCAACCGTCAGTGCGGGAACTTCGCCGGGAACAGAGTCAACCTCCGCCGGCGGAGAAGAGTTTGTGGAGGTCACTCTCGATCTTCAAGACGATGACACTATCGTCCTTCGGAGCGTTGAACCAGCCACTGTCATTAACGTTGTTGTTGACAGTGGTACCACTGGTGGCAGTGGACACGAAACTCCGGCGTCTGTTTCTAGGTCGCCGACGATCCGGCGGACCTCGTCAAGAGGCTTGCGGCAGTTCTCGCAGGAGCTGAAGGCGGAGGCGGTTGCAAAGGCAAAGCAGTTCTCGCATGAGCTTAAGGCAGAGCTGCGACGGTTCTCGTGGAGCCGTTCGTCTTCGTCAGCTCAAAATGTTGGCGGAAGCAATGCCGGCGGCGGATTTGAGACGGCGCTGGCAGCTCGCGCTCTAAGAAAGCAGCGCGCTCAGCTAGATCGCACTCGTTCCGGTGCTCACAAAGCACTGCGCGGTCTGCGATTTATTAGCAGTAAATCAAATAATGGCGTTGATGCGTGGAACGAGGTGCAGAGCAACTTCAATAGGCTCGCCAAGGACGGTTATCTCCATCGCTCCGATTTTGCTCAGTGCATAGGAATGAGAGATTCCAAGGAATTCGCTCTGGAATTATTTGATGCTCTAAGCCGGAAGCGAAGGTTGACGGTTGAGAAGATAAGCAGGGATGAACTTTTTGAATATTGGACGCAAATTACCGATCAAAGCTTTGATTCGCGACTTCAGATCTTCTTCGACATGGTGGATAAAAACGAAGATGGAAGAATCGCCGAAGAAGAAGTAAAAGAGATCATCATGTTGAGTGCTTCAGCAAATAAGTTATCGAGATTAAAAGAGCAGGCTGAAGAATATGCCGCTCTGATTATGGAAGAGTTAGACCCAGAAGGACTTGGTTACATCGAGCTATGGCAATTGGAGACGCTTCTTTTGCAGAAGGACACGTACCTTAACTACAGCCAAGCTCTAAGCTACACAAGCCAAGCTTTGAGCCAGAACCTTCAGGGACTAAGGGCAAGAAGTCCTATTCGTAGGGCGAGCCGCAGGTTGGTCTACTATTTGCAAGAGAATTGGAGGAGACTTTGGCTCTTAACATTGTGGGTTTGCATAATGATTGGGCTGTTCACATGGAAGTTCTTTCAGTATAAGCAGAAAGATGCCTTTCAAATAATGGGTTACTGTCTTCTAACGGCCAAAGGTGCCGCTGAGACTTTAAAGTTCAACATGGCAATTATACTATTGCCCGTATGTAGAAATACCATTACTTGGCTTAGGTCTACCAAGCTGGCTTATGCTGTACCTTTTGACGACAACATTAACTTTCATAAGACAATTGCTGCGGCCATTGTGGTTGGTGTTATACTTCATGCCGGGGATCACCTTGCATGCGATTTTCCAAGACTTGTAAGAGCTTCTGAGGCTGATTACGAGAAGTATTTGAAGGGTGTATTTGGTGATCATAAACCCAGTTACCTAGACATTGTTAAAGGGATTGAGGGTGTGACTGGAATATTGATGGTGATTTTAATGTCAATAGCATTTACACTTGCAACTAAATGGTTCAGGAGAAATCTGATTAAGCTGCCTAAACCATTTAGTAGGCTTACTGGCTTTAATGCCTTCTGGTATTCACACCATCTGTTTGTCATTGTTTATGTCCTGCTCATCATCCATGGTATAAAGCTTTATCTTGTGCACAAATGGTACCTCAAAACGACATGGATGTATCTTTCAATTCCAGTTTTACTTTATGCGGCAGAAAGAACAATCAGATTCTTCCGTTCTGGTTTCTATACTGTCCGTCTTATAAAGGTCGCCATATATCCTGGAAATGTTCTAACATTGCAAATGTCTAAGCCTCCCCAGTTCCGATACAAGAGTGGACAATACATGTTTGTACAATGTCCCGCTGTTTCTCCGTTTGAATGGCATCCATTTTCTATTACCTCATCCCCTGGCGATGACTACCTGAGTGTTCACATTCGGCAATTGGGTGATTGGACACAGGAGCTTAAAAGGGTATTCGCTGAAGCATGTGAGCCCCCTGTATCCGGAAAAAGTGGCCTTCTCAGGGCTGATGAAACAACCAAGAAAAGTCTTCCAAAGCTAAAGATAGACGGACCTTATGGTGCGCCAGCTCAAGATTATAGAAAATACGATGTTTTGTTACTTGTCGGTCTCGGAATAGGAGCAACACCTTTCATCAGCATTCTGAAAGATCTTCTAAACAACATCATCAAAATGGAGGAGCAGGCGGATTCAGTCTCTGATATAAGTAGAGGTTCAGACCAAAGTGTTGGGAGTACAGATTCACCATCTCTAAACAAAATTGCTCCAAAACGGAAGAAAACATTGAAGACTACCAACGCTTATTTCTACTGGGTTACAAGAGAGCAAGGTTCTTTTGATTGGTTTAAAGGAGTCATGAATGAAGTAGCTGAACTTGATCAACGGGGTGTCATTGAGATGCACAATTACTTGACTAGTGTATACGAGGAAGGTGATGCAAGATCTGCCCTCATTACCATGGTGCAAGCACTCAACCATGCCAAAAACGGTGTTGATATCGTCTCAGGGACTAGGGTGCGAACCCATTTTGCTAGGCCTAACTGGAAGAAGGTATTCTCCAAAATGTGTTCCAAGCACTATGGCGGACGAATAGGGGTATTTTATTGCGGAGCACCAGTTTTGGCAAAAGAAATTAACAAGCTCTGCTTCGACTTCAATGAAAAAGGTCCAACAAAATTTGAGTTTCATAAGGAACACTTCTAA 2841 0.4548 MNGHPKHQRRWASDTVPARATVSAGTSPGTESTSAGGEEFVEVTLDLQDDDTIVLRSVEPATVINVVVDSGTTGGSGHETPASVSRSPTIRRTSSRGLRQFSQELKAEAVAKAKQFSHELKAELRRFSWSRSSSSAQNVGGSNAGGGFETALAARALRKQRAQLDRTRSGAHKALRGLRFISSKSNNGVDAWNEVQSNFNRLAKDGYLHRSDFAQCIGMRDSKEFALELFDALSRKRRLTVEKISRDELFEYWTQITDQSFDSRLQIFFDMVDKNEDGRIAEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRARSPIRRASRRLVYYLQENWRRLWLLTLWVCIMIGLFTWKFFQYKQKDAFQIMGYCLLTAKGAAETLKFNMAIILLPVCRNTITWLRSTKLAYAVPFDDNINFHKTIAAAIVVGVILHAGDHLACDFPRLVRASEADYEKYLKGVFGDHKPSYLDIVKGIEGVTGILMVILMSIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGIKLYLVHKWYLKTTWMYLSIPVLLYAAERTIRFFRSGFYTVRLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSSPGDDYLSVHIRQLGDWTQELKRVFAEACEPPVSGKSGLLRADETTKKSLPKLKIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEQADSVSDISRGSDQSVGSTDSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHYGGRIGVFYCGAPVLAKEINKLCFDFNEKGPTKFEFHKEHF 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03108 946 Coils Coil 761 781 - -
Aip03g03108 946 SUPERFAMILY Riboflavin synthase domain-like 621 734 IPR017938 -
Aip03g03108 946 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 618 738 IPR017927 GO:0016491
Aip03g03108 946 Gene3D - 733 946 IPR039261 -
Aip03g03108 946 PANTHER NADPH OXIDASE 25 946 - -
Aip03g03108 946 MobiDBLite consensus disorder prediction 1 37 - -
Aip03g03108 946 ProSitePatterns EF-hand calcium-binding domain. 273 285 IPR018247 -
Aip03g03108 946 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 740 946 IPR039261 -
Aip03g03108 946 Pfam Ferric reductase like transmembrane component 423 579 IPR013130 -
Aip03g03108 946 SFLD NADPH oxidase subgroup (NOX) 108 946 - -
Aip03g03108 946 Gene3D Translation factors 608 700 - -
Aip03g03108 946 MobiDBLite consensus disorder prediction 779 798 - -
Aip03g03108 946 PRINTS Cytochrome B-245 heavy chain signature 524 547 IPR000778 GO:0016020|GO:0016491
Aip03g03108 946 PRINTS Cytochrome B-245 heavy chain signature 724 737 IPR000778 GO:0016020|GO:0016491
Aip03g03108 946 PRINTS Cytochrome B-245 heavy chain signature 747 764 IPR000778 GO:0016020|GO:0016491
Aip03g03108 946 Coils Coil 291 311 - -
Aip03g03108 946 Pfam Respiratory burst NADPH oxidase 163 263 IPR013623 GO:0004601|GO:0050664
Aip03g03108 946 CDD NOX_Duox_like_FAD_NADP 625 888 - -
Aip03g03108 946 SUPERFAMILY EF-hand 187 342 IPR011992 -
Aip03g03108 946 PANTHER RESPIRATORY BURST OXIDASE2 25 946 - -
Aip03g03108 946 MobiDBLite consensus disorder prediction 19 34 - -
Aip03g03108 946 ProSiteProfiles EF-hand calcium-binding domain profile. 260 295 IPR002048 GO:0005509
Aip03g03108 946 MobiDBLite consensus disorder prediction 69 95 - -
Aip03g03108 946 CDD EFh 243 290 IPR002048 GO:0005509
Aip03g03108 946 Pfam FAD-binding domain 621 735 IPR013112 GO:0016491
Aip03g03108 946 Pfam Ferric reductase NAD binding domain 742 928 IPR013121 GO:0016491
Aip03g03108 946 Gene3D - 164 281 - -
Aip03g03108 946 SFLD Ferric reductase subgroup (FRE) 380 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03108 Aip-Chr3 98769871 98778338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03108 8 946 Miscellaneous Gene Families AT1G64060 78.692 0.0 1550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03108 K13447 - gmx:100781551 1664.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03108 03 98769871 98778338 Aip03g03108 03 98769871 98778338 ECH
Aip05g01106 05 15957045 15964373 Aip03g03108 03 98769871 98778338 PCT