Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03105 ATGGCTTATCAGAATCAGAACCAGAGCCAGCAGCGGAGGGATCAATTCAAACCATTAGCTCCATTCATATCATCGAGTCCCAGTCCCCCTCCCAGTCCCTTCAACACTAACCACCATGCCATTTCCGAAAAGCAAATCAGTCGCATCAAGAGAGCCCTCTGTTGTTGCGGCTGCATCACTGCCCTCTTCTGCATAGTCGCAGTCATACTCATAGTTCTTAGCTTCACCGTTTATAACGTCACGGATCCAGAGGTGAGGCTCAACGGCGTTACAATCATCAACGGAACCCTAAACCTAAAGGCAAACGCCACTTCTCCTTCTCCTTCTGGTAACGTCACGCTTCTCGCTGACTTGTCCGTGAAAAACCGAAACTCCTTCGCCTTCAGGTACGGCACCACAACCACAACGGTTTATTACGAGGGGAGGGGAATCGGCGAGGGAACGATGCCGCCGGGGAAGACGAAAGGGAAGAGGACAACGAGGTTTAACGTGACGATGCAAGTGGTGGCGCAGAAGCTGGTGGATGCGCCGGGGCTGAGGAGCGACGTTGAGGACGATCAGGCAGTGAATATAAGCAGTTACGCTCGGATTGATGGGAAGGTGAAGGTTCTAAATTTGTTCTACAGAAAAGTTGTGGTTCTTTTGAATTGCACAGTTGAATACAACGTCACCACTGGCCATATCTTGCATGGTGACAACTGCCTCAACGATATTAGATTGTAG 723 0.5021 MAYQNQNQSQQRRDQFKPLAPFISSSPSPPPSPFNTNHHAISEKQISRIKRALCCCGCITALFCIVAVILIVLSFTVYNVTDPEVRLNGVTIINGTLNLKANATSPSPSGNVTLLADLSVKNRNSFAFRYGTTTTTVYYEGRGIGEGTMPPGKTKGKRTTRFNVTMQVVAQKLVDAPGLRSDVEDDQAVNISSYARIDGKVKVLNLFYRKVVVLLNCTVEYNVTTGHILHGDNCLNDIRL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03105 240 Pfam Late embryogenesis abundant protein 118 217 IPR004864 -
Aip03g03105 240 Gene3D - 67 216 - -
Aip03g03105 240 SUPERFAMILY LEA14-like 66 176 - -
Aip03g03105 240 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 35 238 - -
Aip03g03105 240 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 35 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03105 Aip-Chr3 98670657 98671681 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03105 - - adu:107479837 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03105 03 98670657 98671681 Aip03g03105 03 98670657 98671681 ECH