Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03043 ATGGAAGGCATGAGATATGTCGTGGAGGTTGAGAAAGCGAGGGAAGCAACACAAGGTAAACCATCAATGGGTCCCGTTTACCGGGGCAAGTATCCGAATGATTCCACTACTCCTCCCATCGACGTTCTCAATAGCTGTTGGGACATTTTCCGATCGGCTTATGAGAAGTATCCAACAAATACAATGCTTGGTACCCGGGAAATTGAGAATGCAAAAGCTGGCAGGTACAAGTGGCAAACTTACAAAGAAGTGTATGAAGTGATACAGAAAGTTGGAAGCTCTATCCGCAGTTGTGGTTATGGGCAAGGAGTGAAATGCGGTATCTATGGTGCCAATTGCCCTGGGTGGATAATAAGCATGGAGGCCTGTAATGCTCATGGACTTTATTGTGTTCCTTTGTATGATACATTAGGTGCTGGAGCAGTGGAGTTTATTATATGCCATGCAGAAATCTCAATTGCTTTTGTAGAAGAAAAGAAGATATCTGAGCTATTGAAGACATTTCCAAATGCATCAAAGTTTCTCAAGACACTTGTGAGCTTTGGAAAGTTTACTCCAGTACAAAAGCAACAAGTTGAAAATTTGGGGGTGAAAAGCTATTCATGGGATGAATTTTTACAAGTGGGTGAAAATCAGAATTTTGATCTTCCTGTGATAAAAAAGAGTGACATCTGTACAATAATGTATACAAGTGGAACAACTGGTGACCCTAAGGGAGTCCTGTTATCCAATGAGTCCGTACTTACTGCGGTATCTGCGATACTGCAATTTCTAAGTAGTTGCAAACACTCTTTGCGGAACAAAGAAGTGTATATATCATATCTTCCCCTTGCTCATATCTTTGATAGGGTCATTGAGGAGGCAATGATATATGTTGGTGCCTCAATAGGATTCTGGCGTGGGGATGCCAGATTGTTACTTGAAGACGTTGCGGAGCTAAGACCAACTATTTTCTGTGCTGTTCCACGTGTGCTTGATAGAGTGTACACAGGCTTGCAAAATAAGATTTCTGCCGGGGGGTTTGTGAAGCAGACAATGTTCAATTTTGCTTACTCATACAAGTTGAATAATCTAATGAACGGAGTAGGCGTTGAGGACGCAGCTCCATTGTTTGACAGCCTTGTATTTAGCAAGATAAAACAAAGCTTAGGGGGTAGAGTACGAATTCTTTTGTCTGGAGGAGCACCACTAGCTAAACATGTGGAACTTTTTTTGCGGGTTGTGACTTGTTCTCTTGTCATACAAGGATATGGATTGACTGAAACGGGTGCGGCATCATTTGCCCAGCTATTAAACAACTTCGACATGCTTGGTACAGTGGGGGTTCCATTACCATATGTGGATGCATGCTTGGAATCTGTTCCTGACATGGGATATGATGCCCTTGCAAGCACACCAAGGGGAGAGGTATGTATAAGGGGTGGTACTTTGTGTTCAGGGTATCACAAAAGGGAAGATCTCACCAACGAGGCTATAATAGATGGATGGTTCCATACAGGAGAATATGTTGCTGTTGAACACCTGGAGAATGTTTATGGTCAAAGCTCTGTTCTTGAATCAATATGGGTCTATGGAAGCAGTTTCGAGGCCTACCTTGTTGCCGTGATTAACCCCAAGAAAGATGCACTTGAAAGGTGGGCGGAAGAAAATAATATAACCAAGGACTACAATTCTCTATGTGAAGATCCAAAGGCAAAAGCCTACGTGCTTGCAGAACTCGTAAATACTGCCAAGGCAAAAAAGTTGAAAGGTTTTGAGTTCATAAAAGCGATTCATCTTGACCCGGTTCCTTTTGACCAAGACCGTGACCTTATCACGCCAACATTTAAGAAGAAGAGACCTCAGATGCATAAATACTACAAGAATAATATTGACGAAATGTACAAGTCAATAAACAACAAAACCAGTGCGTAA 1914 0.4206 MEGMRYVVEVEKAREATQGKPSMGPVYRGKYPNDSTTPPIDVLNSCWDIFRSAYEKYPTNTMLGTREIENAKAGRYKWQTYKEVYEVIQKVGSSIRSCGYGQGVKCGIYGANCPGWIISMEACNAHGLYCVPLYDTLGAGAVEFIICHAEISIAFVEEKKISELLKTFPNASKFLKTLVSFGKFTPVQKQQVENLGVKSYSWDEFLQVGENQNFDLPVIKKSDICTIMYTSGTTGDPKGVLLSNESVLTAVSAILQFLSSCKHSLRNKEVYISYLPLAHIFDRVIEEAMIYVGASIGFWRGDARLLLEDVAELRPTIFCAVPRVLDRVYTGLQNKISAGGFVKQTMFNFAYSYKLNNLMNGVGVEDAAPLFDSLVFSKIKQSLGGRVRILLSGGAPLAKHVELFLRVVTCSLVIQGYGLTETGAASFAQLLNNFDMLGTVGVPLPYVDACLESVPDMGYDALASTPRGEVCIRGGTLCSGYHKREDLTNEAIIDGWFHTGEYVAVEHLENVYGQSSVLESIWVYGSSFEAYLVAVINPKKDALERWAEENNITKDYNSLCEDPKAKAYVLAELVNTAKAKKLKGFEFIKAIHLDPVPFDQDRDLITPTFKKKRPQMHKYYKNNIDEMYKSINNKTSA 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03043 637 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Aip03g03043 637 Pfam AMP-binding enzyme 69 505 IPR000873 -
Aip03g03043 637 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 501 - -
Aip03g03043 637 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 500 631 - -
Aip03g03043 637 SUPERFAMILY Acetyl-CoA synthetase-like 39 629 - -
Aip03g03043 637 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 501 - -
Aip03g03043 637 Gene3D - 42 512 IPR042099 -
Aip03g03043 637 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 500 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03043 Aip-Chr3 93518938 93527450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03043 5 630 Acyl Lipid Metabolism Gene Families AT4G11030 62.730 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03043 K01897 - gmx:100811306 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03043 03 93518938 93527450 Aip03g03043 03 93518938 93527450 ECH