Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03033 ATGACACTGAACTTGTGCTCTCCATGCTTCTCTCGCCTCCTCCTTCGTCACTCTTCTTCTCCGCTCAACAAACTCCCCGAAACCTGTGCAAACCACAGCTCCAACACTCTTCTTCCAACTCTCATCTTCTCCTCTTCTCCGTTTCTTCCCTTCACTTCCAACAACCTCTCCAGAGCTTCCCTTAGTGAAAGCCACAATGAGATTTCTCAGGATGCCGGCCAGCTCGACCACCACCAGCTCCTCCTCCGAGTCGCCGCCTCTGCCAAAGACGCCGATGATGCCTTGCTCATGATCGCACAGAACTCTTCAAGAAACGGAGGCGGCCTCGTTTCCGCTGACGATTCTTCCACCATCATCTCCGCCGCGCTTCAGCGGAACAATTCCGAGCTCGCGTTGTCCATTTTCTACGCCATGCGCGCAAGTCTCGATTCAGTTGGCGGGAATGGACCTTTGGTTGAGGGATGGAAGTGGTCGAGGCCAAATGCACATGTATATACGATCTTGATTCAGGGTTTGGCGGCATCTCTGAGGGTTTCTGATGCCCTTAGGGTGCTCAAATATATCTGTGAGGTTGGGGTATCCCCTGGTGAGGAGGTCCGATTTGGAAAGGTAGTGAGGTGTCCTAGTTGTCAGATAGCTGTTGCAGTTGCACAGCCACAACAAGGTATTCAGATTGTATCTTGTTCAAAGTGTCGCTACCAGTATGAGCTTGTTTCAGGTGACATAGTTAGTATTCAGTCAGAAGAAATCAGGTTGGTGCAAACCCCTTCTGGTATGGCTCGCACCCACAGATTTGCAACCGAGACGGTTGATGTTCCCGCACAAGAAGGTGAAAGGGTAACTGTTGCGGTGGCAGCTCCATTAAATGTATATAGAAAAGTGGGGCCCTTTAAATTTAGCCCAAGGGCCCCTGATCTCTATCCTGGCGAGGCTATGTGCATAACAAACCACAAAGATGGGCGAGAATCAATTCTGTTAAGAGCCCCAACAAAAGAGGGAAATTCATCATTACTTAATCCCTCAGTCCTCTTTCCCCTTCTTGCTGTCCTTGCCACTGGTGATGCTGCCTCTGGACTTATTGACCCCGGGTTGCCCCAATTCCTATCAGTTGTTGCAGTTTCATCACTCGCTGTTGGAGCCACGTTAAATTCCGTCGTTTTTCCACAGTTGAAGCAGCTTCCACAAGGGTCGGTTGAGGTTACTGCTATCAAACAACGACTTCTATCTCAGTATGATGTGATTCTGTCACGCATCAAAGACCTAAAAGAGGCTGCTGAAAAAGAGATCTGGATGTTAGCTCGAATGTGCCAACTCGAGAACAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGACTCGTAGAAGTAAAGTCAAAAGGGTGCGAGAGAGCCTGCAAAACTCCCTCAGGGGAAGGATTGAATTGATTGATAGCTATGCCAGGATTTCTTCAATGATTGAAATTGAAGTGGAGATGGAAACAGATGTTCTTGCTGCTGAAACTGCTAGCAATGCGGATACTATCACAGAACAGATAGAGCAAATTATGGAGATGGAAAATCTGGAGGAGAGATGGAAAATAGAAGCAGAAGCCAATGACGAGGCCGAAAGAATCCTTAGTTCTCAACCTATGCCTTCTGAGGACGTTTAA 1647 0.4809 MTLNLCSPCFSRLLLRHSSSPLNKLPETCANHSSNTLLPTLIFSSSPFLPFTSNNLSRASLSESHNEISQDAGQLDHHQLLLRVAASAKDADDALLMIAQNSSRNGGGLVSADDSSTIISAALQRNNSELALSIFYAMRASLDSVGGNGPLVEGWKWSRPNAHVYTILIQGLAASLRVSDALRVLKYICEVGVSPGEEVRFGKVVRCPSCQIAVAVAQPQQGIQIVSCSKCRYQYELVSGDIVSIQSEEIRLVQTPSGMARTHRFATETVDVPAQEGERVTVAVAAPLNVYRKVGPFKFSPRAPDLYPGEAMCITNHKDGRESILLRAPTKEGNSSLLNPSVLFPLLAVLATGDAASGLIDPGLPQFLSVVAVSSLAVGATLNSVVFPQLKQLPQGSVEVTAIKQRLLSQYDVILSRIKDLKEAAEKEIWMLARMCQLENKISAVGEPSYRTRRSKVKRVRESLQNSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNADTITEQIEQIMEMENLEERWKIEAEANDEAERILSSQPMPSEDV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03033 548 Gene3D Tetratricopeptide repeat domain 71 202 IPR011990 GO:0005515
Aip03g03033 548 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 161 195 IPR002885 -
Aip03g03033 548 Coils Coil 517 537 - -
Aip03g03033 548 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 251 - -
Aip03g03033 548 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 253 547 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03033 - - gmx:100781803 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03033 03 92577745 92582980 Aip03g03033 03 92577745 92582980 ECH