Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03027 ATGGATTTCGAGAGGGAAAATTTTGATCTCTCAGGACCCTTGCATTTGACTTGTGTCCAATGGGATAACGCGCATCATCGAATGTCAGTTGCTGCTAGTTTGGTCCAAGCTGTTTACATTCTAGAAAGGGACCGGCAAGAAAAACGCAAAGATCAAAATGCTCTTGCACTGCCTTGGTGGGCATTCTTCCACTTTCAGTTGCTTCGTCCACTTGTAGATGATGTTGATTCTTCCATCTTTGGTGCAATCTTTGAGTTCAAACCTCCATTGTCTCCACGTAATGACACTTTATACCGAAGTCCACGTTATGTGATTGCCTTTCGTGGTACTCTAACCAAACAGCACTCGGTTTCACGTGACATTGAGCTGGATATCCACTTTATCCAACAAGGTCTTCATCAAACTTCTCGCTCTACCATAGCTCTGAATGCTGTTCGAAATATGGTAGCAACTGTAGGTGATTCGAATGTTTGGTTAGCTGGACACTCCTTAGGATCAGCAATGGCATTGCTTACTGGCAAAACCTTGGCTCAGACGGGCACGTTTGTTGAATCTTTTCTTTTCAACCCACCATTTGTATCTGCTCCAATAGAGAGAATTAAGGATGAGAGAGTGAAACATGGGATTCGATTTGCTGGCAGTGTGATAACAGCTGGACTCACCCTAGCCATGAAAGCCAAGCAGCAGCAGCAGGGCAAGCAGCCGCTGCAACAGGGCAAGCAGCCGCAGCAGCAGAAGGATCTGTGTGTTGCATCATTTGATGCTTTGGCTGCTTGGGTCCCAGGTTTATTTGTGAATCCATCGGACCATATATGCTCAGAGTATATTGGATACTTCGAGCACAGAAGAAAGATGGAGGAAATTGGAGCAGGATTCATTGAAAGGTTAGCCACTCAAAACTCGCTTGGTGGATTAGTGATGAGTGCGTTTGGGAAGGAATCTGAAGCCCTGCACCTCATTCCTTCGGCTTCTATGACAGTTAATGTTATTCCTGCACGTGATTTCCGAGAAGCCCATGGGATTCACCAATGGTGGCAACCCGATTTGCGCGTCGAACGCAAGCTCTACAAATACAAGTAG 1080 0.4583 MDFERENFDLSGPLHLTCVQWDNAHHRMSVAASLVQAVYILERDRQEKRKDQNALALPWWAFFHFQLLRPLVDDVDSSIFGAIFEFKPPLSPRNDTLYRSPRYVIAFRGTLTKQHSVSRDIELDIHFIQQGLHQTSRSTIALNAVRNMVATVGDSNVWLAGHSLGSAMALLTGKTLAQTGTFVESFLFNPPFVSAPIERIKDERVKHGIRFAGSVITAGLTLAMKAKQQQQGKQPLQQGKQPQQQKDLCVASFDALAAWVPGLFVNPSDHICSEYIGYFEHRRKMEEIGAGFIERLATQNSLGGLVMSAFGKESEALHLIPSASMTVNVIPARDFREAHGIHQWWQPDLRVERKLYKYK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03027 359 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 358 - -
Aip03g03027 359 PANTHER LIPASE CLASS 3-LIKE 4 358 - -
Aip03g03027 359 Gene3D alpha/beta hydrolase 25 206 IPR029058 -
Aip03g03027 359 SUPERFAMILY alpha/beta-Hydrolases 32 194 IPR029058 -
Aip03g03027 359 Pfam Lipase (class 3) 141 182 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03027 Aip-Chr3 91965097 91967797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03027 1 291 Acyl Lipid Metabolism Gene Families AT2G05260 56.701 6.52e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03027 - - gmx:100811139 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03027 03 91965097 91967797 Aip03g03027 03 91965097 91967797 ECH
Aip05g01149 05 16759474 16760757 Aip03g03027 03 91965097 91967797 PCT