Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03026 ATGAATAGACCCACTCCCCCTTCCAGAACTCACCAACCACCACCACCGCCACCGCCACGACAATATCAGCCGCCACCCCGACGATATCAACCACCCCCACCTACGACACCGAGATACCAACCACCGCCACGACAACAACCACCACCACTACAACAACAACCACCAGCAGCACCACCACCACCACTACATGTTACGGCGGAGGAAAGAGGGGCACCTATCATTGCCACCAAGGCAAAGAGACCACGGCCACCGTCAGGGCGCACCAACTTGGCTTCCTGCGTCGTTGCCACCATCTTCCTAATCTTCATCATCATCGTCATCCTCATCGTCTACTTCACCGTCTTCAAGCCACAGGACCCAAAGATCGCCGTCAGCGCCGTCCAGCTTCCGTCTTTTTCCGTCGTTAACGGCACCGTCAACTTCACGTTCTCCCAGTACGCATCCGTCAGAAACCCTAACCCCGCGGTGTTCTCTCACTACGACAGCTCCCTACAGCTTCTCTACTCAGGCACCCAGGTGGGCTTCATGTTCATCCCCGCCGGCGAGATCGACGCCGGGAGGACAAAGTACATGGCGGCGACGTTCTCCGTGCAGTCGTTCCCTCTGGCGGCGCCGCCTGTGGCGGTGACGGGGATGCCGACAGTGATGAACGGTGGAGGAGTTGGGTTCAACTACGGGATGAGAGTGCAGCCAACGATGGAGATCGAGTCGAAGTTGGAAATGGCGGGGCGCGTGAGGGTTCTACACTTCTTCAGCCACCGCGTGCAGGCCACTGCCGGTTGCAGGGTCGCCATTGCCGTCACCGACGGATCTGTCTTGGGTTTTCACTGCTAA 834 0.5863 MNRPTPPSRTHQPPPPPPPRQYQPPPRRYQPPPPTTPRYQPPPRQQPPPLQQQPPAAPPPPLHVTAEERGAPIIATKAKRPRPPSGRTNLASCVVATIFLIFIIIVILIVYFTVFKPQDPKIAVSAVQLPSFSVVNGTVNFTFSQYASVRNPNPAVFSHYDSSLQLLYSGTQVGFMFIPAGEIDAGRTKYMAATFSVQSFPLAAPPVAVTGMPTVMNGGGVGFNYGMRVQPTMEIESKLEMAGRVRVLHFFSHRVQATAGCRVAIAVTDGSVLGFHC 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03026 277 PANTHER OS05G0238400 PROTEIN 81 277 - -
Aip03g03026 277 MobiDBLite consensus disorder prediction 1 62 - -
Aip03g03026 277 SUPERFAMILY LEA14-like 100 202 - -
Aip03g03026 277 MobiDBLite consensus disorder prediction 1 64 - -
Aip03g03026 277 Pfam Late embryogenesis abundant protein 148 256 IPR004864 -
Aip03g03026 277 PRINTS Proline rich extensin signature 4 16 - -
Aip03g03026 277 PRINTS Proline rich extensin signature 21 42 - -
Aip03g03026 277 PRINTS Proline rich extensin signature 43 59 - -
Aip03g03026 277 PRINTS Proline rich extensin signature 71 88 - -
Aip03g03026 277 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 81 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03026 Aip-Chr3 91568862 91570216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03026 - - vun:114178281 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03026 03 91568862 91570216 Aip03g03026 03 91568862 91570216 ECH
Aip05g01151 05 16773067 16774106 Aip03g03026 03 91568862 91570216 PCT