Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03009 ATGGCGTCCTCTATTTCTCTGTCCATTCCACTCTGCCCACCCTCCAACTCTCTCTCCACTTCCCTGTCTCCTTCACACAAGCCTCCCTTTCTCCAAAAGAGAACCCAATTATCCGGGTTCCCTCTCAGAGCCCAAACCCTCGACTTCTCTGGCTCGTTCTTCGAAGGCGCTGGATTCGGGTCCGAGGACGACCCCATCACTCCCGGGCCTGGCTTTACAGCTACCGAACCTAAGGAGGAACCCCAGTGCCCACCCGGACTCAGGCAATACGAAACTATGGCGGTTTTGAGGCCTGACATGTCCGAGGATGAGAGACTTTCACTCACCCAGAAGTACGAGGAGCTGCTTGTTGCTGGGGGTGCCATGTATGTGGAGGTATTTAACAGAGGAGTAATTCCACTTGCGTATAGCATAAGGAAGAAAAACAGAGCTGGAGAGTCCAACACTTACTTGGATGGTATCTATCTTCTCTTCACCTACTTCACCAAGCCTGAATCCATTACCATTCTTGAGGACACACTCCTCGCTGATGACAATGTCATCCGTTCATCCACTTTCAAAATTAGGAAAAGGAAATATTAG 582 0.5034 MASSISLSIPLCPPSNSLSTSLSPSHKPPFLQKRTQLSGFPLRAQTLDFSGSFFEGAGFGSEDDPITPGPGFTATEPKEEPQCPPGLRQYETMAVLRPDMSEDERLSLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIRKKNRAGESNTYLDGIYLLFTYFTKPESITILEDTLLADDNVIRSSTFKIRKRKY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03009 193 MobiDBLite consensus disorder prediction 62 83 - -
Aip03g03009 193 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 18 193 - -
Aip03g03009 193 Pfam Ribosomal protein S6 89 187 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip03g03009 193 Hamap 30S ribosomal protein S6 [rpsF]. 87 190 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip03g03009 193 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 18 193 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip03g03009 193 CDD bS6_chloro_cyano 87 188 - -
Aip03g03009 193 SUPERFAMILY Ribosomal protein S6 87 191 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip03g03009 193 Gene3D - 86 193 IPR014717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03009 K02990 - gmx:100305490 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03009 03 89280348 89281409 Aip03g03009 03 89280348 89281409 ECH