Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02991 atggcacagtgcttgggtagagactctagggaaggaaaGAGTGCTGATTCCGATGCCACCAAGCTATGGGACGGTATAAAGGCAGTGCCACATCCTGAGACCAAAATTCACAATTCAAATGAAGTAGAACCTAATGTGGTAGGTGGCGTTACTGGCAAAAATCCTGCATCGAATTTGCAAGAGGATTTGAAGGCTAATAATTTGGAAGGAAATAATGTTGAGGAGGCTTGCATGCATGATGAACCAGGCTGGGAGCAAGTTGTGAGGAAAGGTAAAACCAAGCTGGGTCAGAAGCAATTTAACAAGGTCCAAAGAGGCATTCAATCCAAAACTGATTCAAGTAGAGTAATCAGGCCCACCATTCACTTCTCTCACACGAATGGATCCAGCTCCTATCGCGCTAGGGTCGGGTCACGAGTCAAGGTCGGACACAGCGCTTCCCGTGTTGGTGAGACGTCGATCTCCTCAACCCGACACaccccagtgctttgtgggtcctctctccggaaacgaccaaggccggggtccctacagagctcgccagttgagaagaatggaggcacggtggtggaagcATCGTCATGTCTTCCTGCAACCGTGAAGGAGGGTGTTACCGTGGCGGTTCCATTGGAGAAGGAAGGCGCATTGCCGGCTGTTACTGCGTCGGTAGGCGGGATTAAGGAGATATTCCAGGGAGATTCGGCAAACCtgaaggtcacgggagtcacttccgctgggcaagcctcgTCGGGAGTGACCAGTATAAAATGCGAAGGGCAAACGGGGCGTACCATTTTTCATTCAATAAACGAAAACCAATCTAACAAACCAGCCATCAACTTGGCCACCAGAAAACCCAACACCACCGTTAACAACCACTTCACCGTTTACAGAGCGCAACTACAACACGGTGACGCCATGACTGGCTCGTGGGCTCGCGGGTCTCTCATTGTTCTCGCCATCGTTTCCCTCGGATGTATGTTTGCAATTTCCATTGCAAAAGAGGAAGCAACCAAGTTGGGTACAGTTATTGGGATAGATCTTGGAACAACTTATTCTTGTGTTGGTGTTTATAAGAATGGCCATGTTGAGATCATAGCCAATGACCAGGGTAACCGTATCACCCCATCATGGGTTGCTTTCACCGACAGCGAGAGACTGATCGGGGAGGCTGCCAAGAATCAGGCAGCTGTCAACCCCGAAAGGACCATCTTTGATGTCAAGAGGCTTATTGGAAGAAAGTTTGAAGATAAGGAAGTCCAAAGAGACATGAAGCTTGTGCCATATAAGATTGTGAACAAGGATGGGAAACCTTACATACAGGTAAAGATTAAAGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTTTGACTAAGATGAAGGAAACAGCTGAAGCATTCCTTGGAAAGAAAATCCATGATGCAGTTGTCACTGTCCCTGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCTGGTGTTATTGCCGGTCTGAATGTGGCTAGGATTATTAATGAGCCCACTGCCGCTGCAATTGCGTATGGATTGGACAAGAAAGGTGGCGAGAAGAACATCCTTGTCTTTGATCTTGGTGGTGGGACTTTTGATGTCAGTATTTTGACGATCGATAATGGTGTTTTCGAGGTCCTTGCTACAAACGGAGATACTCATCTTGGAGGTGAGGACTTTGATCAGAGAATAATGGAATACTTCATTAAATTGATCAAGAAAAAGCATGGAAAGGACATTAGCAAGGACAACAGAGCACTTGGCAAGCTCAGGAGAGAGGCTGAGCGTGCCAAGAGAGCTCTCAGCAGCCAGCACCAGGTCCGAGTGGAAATTGAATCACTTTTCGATGGTGTTGATTTCTCCGAACCACTTACCCGAGCTCGGTTTGAGGAGTTGAACAACGATTTATTCCGTAAGACAATGGGGCCTGTGAAGAAAGCAATGGAAGATGCTGGATTACAAAAGAGCCAGATCGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTGCAACAGCTTTTGAAGGACTACTTTGATGGAAAGGAGCCCAACAAGGGTGTCAACCCTGATGAGGCAGTTGCCTATGGTGCTGCAGTCCAAGGAAGCATTTTGAGCGGAGAGGGAGGTGATGAAACCAAAGATATCCTTCTCTTGGATGTTGCTCCACTCACCCTTGGAATTGAGACTGTTGGTGGGGTGATGACAAAGTTGATTCCCAGAAACACAGTTATCCCTACCAAGAAATCTCAGGTGTTTACTACCTACCAGGATCAGCAGACTACTGTCTCCATTCAGGTATTTGAAGGTGAGAGGAGTCTTACAAAGGATTGCCGACTGCTTGGGAAATTTGATCTGTCTGGAATTCCACCAGCTCCAAGGGGTACCCCTCAAATTGAAGTGACCTTTGAAGTTGATGCAAATGGCATCTTAAACGTCAAAGCAGAAGACAAGGGCACTGGTAAATCAGAAAAGATCACCATTACAAATGAGAAGGGACGCCTGAGCCAGGAGGAAATTGAGCGAATGGTTCGCGAAGCAGAGGAGTTTGCCGAGGAAGACAAGAAGGTCAAGGAGAGAATTGATGCCCGCAATGCTCTTGAAACTTATGTTTACAACATGAAGAACCAGATCAGTGACAAAGACAAGCTGGCCGACAAGTTGGAATCCGATGAAAAGGATAAAATCGAGGCTGCAGTGAAGGAAGCGTTGGAATGGCTTGACGACAATCAGACAGTGGAGAAAGAAGATTATGAAGAGAAGCTGAAAGAGGTTGAAGCTGTTTGCAATCCAATTATCACCGCGGTCTATCAGAGGTCAGGTGGGACTCCTGGTGGTGGTGCTTCTGGAGAGGACGAGGATGATTCTCACGATGAACTCTAG 2919 0.4402 MAQCLGRDSREGKSADSDATKLWDGIKAVPHPETKIHNSNEVEPNVVGGVTGKNPASNLQEDLKANNLEGNNVEEACMHDEPGWEQVVRKGKTKLGQKQFNKVQRGIQSKTDSSRVIRPTIHFSHTNGSSSYRARVGSRVKVGHSASRVGETSISSTRHTPVLCGSSLRKRPRPGSLQSSPVEKNGGTVVEASSCLPATVKEGVTVAVPLEKEGALPAVTASVGGIKEIFQGDSANLKVTGVTSAGQASSGVTSIKCEGQTGRTIFHSINENQSNKPAINLATRKPNTTVNNHFTVYRAQLQHGDAMTGSWARGSLIVLAIVSLGCMFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIHDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQISDKDKLADKLESDEKDKIEAAVKEALEWLDDNQTVEKEDYEEKLKEVEAVCNPIITAVYQRSGGTPGGGASGEDEDDSHDEL 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02991 972 MobiDBLite consensus disorder prediction 123 185 - -
Aip03g02991 972 ProSitePatterns Heat shock hsp70 proteins family signature 2. 534 547 IPR018181 -
Aip03g02991 972 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 724 880 IPR029047 -
Aip03g02991 972 ProSitePatterns Heat shock hsp70 proteins family signature 1. 346 353 IPR018181 -
Aip03g02991 972 CDD HSPA5-like_NBD 341 715 IPR042050 -
Aip03g02991 972 Gene3D - 876 951 IPR029048 -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 480 500 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 342 355 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 808 824 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 668 684 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 392 400 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 370 382 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 727 746 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 540 550 - -
Aip03g02991 972 PRINTS 70kDa heat shock protein signature 700 720 - -
Aip03g02991 972 Gene3D - 526 700 - -
Aip03g02991 972 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 722 875 IPR029047 -
Aip03g02991 972 Gene3D Actin; Chain A, domain 4 566 649 - -
Aip03g02991 972 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 874 957 IPR029048 -
Aip03g02991 972 Pfam Hsp70 protein 343 950 IPR013126 GO:0005524|GO:0140662
Aip03g02991 972 MobiDBLite consensus disorder prediction 948 972 - -
Aip03g02991 972 PANTHER LUMINAL-BINDING PROTEIN 328 958 - -
Aip03g02991 972 Coils Coil 590 610 - -
Aip03g02991 972 SUPERFAMILY Actin-like ATPase domain 341 525 IPR043129 -
Aip03g02991 972 Coils Coil 920 940 - -
Aip03g02991 972 Coils Coil 852 872 - -
Aip03g02991 972 MobiDBLite consensus disorder prediction 148 163 - -
Aip03g02991 972 ProSitePatterns Heat shock hsp70 proteins family signature 3. 671 685 IPR018181 -
Aip03g02991 972 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g02991 972 SUPERFAMILY Actin-like ATPase domain 528 719 IPR043129 -
Aip03g02991 972 Gene3D - 344 715 - -
Aip03g02991 972 PANTHER HEAT SHOCK PROTEIN 70KDA 328 958 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02991 Aip-Chr3 87154013 87161208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02991 317 972 Miscellaneous Gene Families AT5G42020 92.109 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02991 K09490 - gmx:547839 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02991 03 87154013 87161208 Aip03g02991 03 87154013 87161208 ECH