Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02987 ATGGAATTTCAGCACAAGATGGATGAGAGAGACCCACCCGACTATAGTACATTAGCAACAACATCTGTAATACATGTTGATTTGAATGCATATCTGCTTGGGATGGAATTTAATATTGCCTTCTTTGCAAAAGCTATTGGAGACGGAACCACCGTAAAACACTTCATGGAACTTTCTAACGCTAGCAAGAAGGCGATAAATTCCGTTTTCTGGAGTGCAAGCAAGAAGCAATGGCTTGATTACTAG 246 0.4024 MEFQHKMDERDPPDYSTLATTSVIHVDLNAYLLGMEFNIAFFAKAIGDGTTVKHFMELSNASKKAINSVFWSASKKQWLDY 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02987 81 Pfam Trehalase 12 81 IPR001661 GO:0004555|GO:0005991
Aip03g02987 81 Gene3D - 1 81 IPR012341 GO:0005975
Aip03g02987 81 PANTHER TREHALASE 10 81 IPR001661 GO:0004555|GO:0005991
Aip03g02987 81 SUPERFAMILY Six-hairpin glycosidases 10 81 IPR008928 GO:0005975
Aip03g02987 81 PANTHER TREHALASE 10 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02987 Aip-Chr3 86783529 86784149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02987 10 81 Trehalose Biosynthesis Gene Families AT4G24040 51.389 1.12e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02987 K01194 - adu:107479690 160.999