Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02984 ATGCTGGAAACAGTTAAATACCTGATAGGGTCGCCGGGTCCAAGCGGGTTCGGGTCCAAGTCCAACGCCGAACAAGTCACGGAAAACTCCGATCTGCGCTCACTCACGGCCATTATTACCGGTGCCACGTCAGGAATAGGAGCTGAAACGGCAAGGGTTCTGGCGAAACGAGGAGCGAGGCTGGTTCTGCCAGCGCGGAGCCTGAAAGCCGCGGAAGATACAAAGGCTCGCATAGTATCGGAGTTTCCAGATGCTGACGTCATGGTTATGCCGCTCGACCTCAGTTCTCTCACTTCTGTTAGGAACTTCGTGGCTCACTTCCACTCTCTCCGTTTGCCCCTCAATCTCCTCATAAACAACGCTGGCAAGTTTGCACATGAGCATGCCATCTCGGAGGATGGCCTTGAAATGACCTTCGCCACTAATTATCTAGGTCATTTTTTGTTAACAAAGCTTTTATTGAAGACGATGATCGAGACGGCAGAGAAGACAGGGGTGCAAGGGAGGATAGTGAACGTGTCGTCGAGCATCCACGCTTGGTTTTCCGGTGATGTCATCTCATATTTAGCCTCTATTAGCCGCAACAACAAAAGCCATTACGACGCCACACGTGCTTATGCTCTTTCCAAGCTCGCCAACGTCTTCCACACCAACCAACTTGCTCGCAAGCTCCAGCAAATGGGGGCGAACGTGACAGTGAACTGTGTGCACCCGGGGATCGTGAGAACCAGACTCACTAGAGAGCGTGAGGGATTACTCACAGATATAGTTTTCTTTTTGGCTTCCAAGCTCTTAAAGACCATTCCACAGGTAAAAAAATTAGTAATAATGCCTTTCTAA 840 0.5012 MLETVKYLIGSPGPSGFGSKSNAEQVTENSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDTKARIVSEFPDADVMVMPLDLSSLTSVRNFVAHFHSLRLPLNLLINNAGKFAHEHAISEDGLEMTFATNYLGHFLLTKLLLKTMIETAEKTGVQGRIVNVSSSIHAWFSGDVISYLASISRNNKSHYDATRAYALSKLANVFHTNQLARKLQQMGANVTVNCVHPGIVRTRLTREREGLLTDIVFFLASKLLKTIPQVKKLVIMPF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02984 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 252 IPR036291 -
Aip03g02984 279 Gene3D - 22 277 - -
Aip03g02984 279 PANTHER MITOCHONDRIAL PYRUVATE CARRIER 4 270 - -
Aip03g02984 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Aip03g02984 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Aip03g02984 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Aip03g02984 279 Pfam short chain dehydrogenase 36 191 IPR002347 -
Aip03g02984 279 Pfam short chain dehydrogenase 193 249 IPR002347 -
Aip03g02984 279 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Aip03g02984 279 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Aip03g02984 279 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Aip03g02984 279 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Aip03g02984 279 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Aip03g02984 279 PANTHER RETINOL DEHYDROGENASE 4 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02984 Aip-Chr3 86543758 86546322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02984 19 247 Acyl Lipid Metabolism Gene Families AT1G63380 27.234 1.01e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02984 - - gmx:100794347 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02984 03 86543758 86546322 Aip03g02984 03 86543758 86546322 ECH