Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02877 ATGGAAGGAGGCATACCAGAAGCTGATATGTCTGCTTTCAGAGAATGTTTGGCACTTTCATGGAAGAATCCATATGTTCTTCGTCTTGCTTTCTCTGCTGGAATTGGTGGCCTTCTCTTTGGCTACGACACAGGAGTTATATCTGGGGCTCTTCTATATATCAGAGATGACTTCAAAGCGGTAGACAGAAAGACTTGGCTTCAGGAAGCCATAGTAAGTACGGCACTAGCTGGAGCTATCATAGGAGCTGCAGTTGGCGGATGGATCAATGATCGATTTGGAAGGAGAATAGCAATCATTCTTGCAGATGCACTCTTTCTGACAGGTGCAATCATCATGGCTGCAGCAACAAATCCTGCTATTCTCATTGTTGGTCGAGTTTTCGTTGGACTCGGCGTTGGCATGGCTTCGATGGCATCCCCATTGTACATCTCAGAAGCTTCTCCGACCAGAGTTCGCGGTGCTCTTGTTAGTCTCAACAGTTTTCTCATCACGGGGGGGCAATTCCTCTCGTACCTCATCAACTTGGCCTTCACTAAGGCGCCAGGGACATGGAGGTGGATGTTAGGGGTAGCAGCAGTACCTGCAATAGTGCAGATCTTACTAATGTTTTCCCTTCCAGAATCGCCTCGTTGGCTGTACCGGAAGGGTAGGTATGAGGAAGGGCAGGCAATTCTTAAGAAAATCTACCCACCCGAGGACGTGGAAGGCGAAATCCAAGCTTTGAAGGAATCAGTTGACTTGGAGATCAAGGAATCCGAGTCATCAGAGAAAATCAACATGATGAAACTCTTGAAAACCACAGCTGTAAGAAGAGGTTTATATGCAGGAATGGGCCTCCAAATCTTCCAGCAATTTGTTGGTATCAACACTGTGATGTACTACAGTCCCACCATTGTTCAGTTGGCTGGTTTTGCATCTAACAGAACAGCACTACTTCTGTCACTCATCACATCTGGCCTCAACGCATTTGGTTCAATTCTGAGCATATATTTCATTGATAAGACCGGGAGGAAGAAGCTTGCTCTCATCAGTTTGTCCGGCGTCGTGGTGGCTCTGGCTCTCCTAACTGTCACTTTCCGTGAGAGTGAGATTCACTCTCCAATGGTCAGTGCCATTGAAACATCTCATTTCAATACCACCTGCCCTGACTTCAGATCAGCCGTAGACCCTGGTAGATGGACTTGTATGACATGCTTAAAGGCTTCATCGCCGTCTTGCGGCTTTTGCGCTGCTCCTAATGACAAGCTCTTGCCTGGGGCATGTTTGATCTCCAATGACACATCAAAGGACATATGTGGCAATGATCACAGGTCATGGTACACAAGGGGATGCCCAAGCAAATTCGGTTGGGCAGCACTTATAGGCCTTGCACTCTACATCATATTCTTCTCACCAGGAATGGGAACTGTTCCATGGGTTGTGAACTCTGAGATCTACCCTTTAAGGTACAGAGGAGTCTGTGGAGGAATGGCATCCACAACAGTTTGGGTGTCAAATCTCATTGTTTCACAGTCATTTTTATCACTGACACAAGCTATTGGGACAGCATGGACATTCATGATGTTTGGGATTGTAGCTATTGTGGGCATTTTCTTTGTCATTATTTTTGTCCCAGAGACTAAAGGAGTTCCAATGGAGGAAGTAGAGAAGATGCTGGAACAAAGATCTGTGCAGTTCAAGTTTTGGCAAAAGAGGAATTCAGTATCTGAGAAATACTGA 1722 0.4605 MEGGIPEADMSAFRECLALSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRKTWLQEAIVSTALAGAIIGAAVGGWINDRFGRRIAIILADALFLTGAIIMAAATNPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAVPAIVQILLMFSLPESPRWLYRKGRYEEGQAILKKIYPPEDVEGEIQALKESVDLEIKESESSEKINMMKLLKTTAVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALISLSGVVVALALLTVTFRESEIHSPMVSAIETSHFNTTCPDFRSAVDPGRWTCMTCLKASSPSCGFCAAPNDKLLPGACLISNDTSKDICGNDHRSWYTRGCPSKFGWAALIGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGVCGGMASTTVWVSNLIVSQSFLSLTQAIGTAWTFMMFGIVAIVGIFFVIIFVPETKGVPMEEVEKMLEQRSVQFKFWQKRNSVSEKY 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02877 573 Pfam Sugar (and other) transporter 30 361 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip03g02877 573 Pfam Sugar (and other) transporter 450 552 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip03g02877 573 Gene3D MFS general substrate transporter like domains 422 561 IPR036259 -
Aip03g02877 573 Gene3D MFS general substrate transporter like domains 21 380 IPR036259 -
Aip03g02877 573 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 572 - -
Aip03g02877 573 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 572 - -
Aip03g02877 573 CDD MFS_HMIT_like 32 540 - -
Aip03g02877 573 TIGRFAM SP: MFS transporter, sugar porter (SP) family 21 364 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g02877 573 SUPERFAMILY MFS general substrate transporter 19 551 IPR036259 -
Aip03g02877 573 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip03g02877 573 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g02877 573 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g02877 573 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g02877 573 PRINTS Sugar transporter signature 454 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g02877 573 PRINTS Sugar transporter signature 477 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g02877 573 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 542 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02877 Aip-Chr3 77039966 77046506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02877 1 572 Organic Solute Cotransporters AT1G30220 72.000 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02877 K08150 - gmx:100796800 949.888