Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02820 ATGGCAAACGAGCAAACAATGAAGCCGGTAGCCACGCTGCTTTTGGGGCTGAACTTCTGCATGTACGTCATAGTTTTGGGTATTGGTGGATGGGCCATGAACAGAGCTATAGATCATGGTTTTGTCATAGGTGCAGGACTTGAACTTCCAGCACATTTTTCACCAATACAGTTCCCAATGGGAAATGCAGCCACTGGGTTCTTTGTGACATTTGCTTTGATAGCTGGAGTTGTTGGCGTTGGATCAGTCATCTCAGGAATCAATCACATCCGATCATGGACTTCAGAGAGCTTGCCATCTGCGGCTTCCGTTGCCACCATTGCATGGACCCTCACACTTCTTGCCATGGGCTTTGCTTGCAAAGAGATTGAGCTAAACATCAGAAATGCCCGCCTGAAAACAATGGAGGCTTTTCTAATTATCCTTTCAGCTACACAGCTTTTCTACATTGCTGCTATTCATGGTGCTGCTTCATTGAGGAGATAA 486 0.4609 MANEQTMKPVATLLLGLNFCMYVIVLGIGGWAMNRAIDHGFVIGAGLELPAHFSPIQFPMGNAATGFFVTFALIAGVVGVGSVISGINHIRSWTSESLPSAASVATIAWTLTLLAMGFACKEIELNIRNARLKTMEAFLIILSATQLFYIAAIHGAASLRR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02820 161 Pfam AWPM-19-like family 17 156 IPR008390 -
Aip03g02820 161 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 161 IPR008390 -
Aip03g02820 161 PANTHER ABA INDUCED PLASMA MEMBRANE PROTEIN 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02820 Aip-Chr3 65966019 65967861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02820 4 155 Miscellaneous Gene Families AT5G46530 76.974 3.60e-85 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02820 - - gmx:100527291 283.878