Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02777 atggagcctcagcctgagGAGGCTGTTGCACGCCTTGAGGAGTTGCAAAAGTCAATTGAGGCAAAGATGACATTACGACAAAGCAATTTGAATCCTGATAGGCCTGACTCAGGATTTTTAAGGACTCTGGATTCAAGCATTAAGCGCAATACTGCAGTCATTAAGAAACTGAAGCAGATTAATGAAGAGCAGCGTGAAACACTGATGGACGAGTTGCGCAGTGTCAACTTAAGCAAATTTGTCAGTGAAGCTGTGACTGCTATATGTGATGCCAAGCTTAGAAGCTCAGATATACAAGCAGCAGTTCAGGTCTGCTCTTTGCTTCATCAGAGGTACAAGGACTTTGCCCCATGCCTGATTCAAGGACTTCTCAAAGTTTTCTCTCCAGGAAAGCCTGGGGATGAGTCAGATGCAGACAGAAACTTGAAGGCAATGAAGAAACGCAGTACTTTGAAACTTCTATTGGAGCTTTATTTTGTTGGAGTTATTGATGATGGCAACATTTTCATGAATATCATAAAAGATCTAACTGGTATGGATCAGCTAAAAGACCGAGATGCAGCACAAACTAGTTTGACCCTTCTTTCTAGCTTTGCCCGACAAGGGAGAATCTTTCTGGGACTTCCTGTTTCTGGTCCAGAAATTCATGAAGAGTTTTTTAAAGGCCTTAACATTACGGCAGATCAAAAGAAAGTTTTCAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCAGAACTACTTCAGTCTGAGCATTCTTCACTTCGACTAATGGAGCATGAAAATTCTAAGATTCTTAACGCAAAAGGAGAGCTCAGTGATGAAAATATTGCTTCATATGAAAAGCTTCGGAAATCTTATGACCATTTGTATCGTAACATCTCATCATTGGCAGAGGCACTTGATATGCAACCTCCAGTAATGCCAGAAGATGGTCACACAACAAGAGTTACTACTGGTGAGGAAGCTACATCTGCGGGTGGGAAAGATTCTTCTATAGCTGAACCTGTATGGGATGATGAAGATACAAGGGCTTTCTATGAATGTTTACCCGACCTAAGAGCTTTTGTTCCTGCTGTGCTTTTGGGCGAAGCAGAGCCAAAAACAAGTGAGCAATCAGTGAAGAGTCAAGACCAACCAACTGAAATAGTACCTGAATCTGACAAAGGTCAACTGGGCAACCATGACAGTGGAGATGCATCGGCAGAATCTATTGCTTTGCCAGAGGGAGGAAGTGCAGAAAAAGCGAAGGATAAGGAAGAAAGAGAAAAATCAAAAGAATTGGAAAGAGAGAAGGAGAAAGAAAAAGACAATGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAGCCTTGAGGGGACAAATTTGGATGCTTTATTGCAAAGACTTCCTGGTTGTGTGAGCCGGGACCTTATAGATCAATTGACTGTAGAATTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAACTTGTGAGGGCTTTGTTCAATGTACCAAGGACATCTCTGGAGCTGCTACCATATTACTCACGCATGGTTGCTACACTCTCAACTTGTATGAAGGATGTCTCCTCCATTCTTTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAGAAGGACCAGATGAATATTGAGACAAAGATAAGGAACATCAGGTTCATAGGAGAACTTTGCAAGTTCAAAATTGCCCCTGCTGGCCTAGTCTTTAGTTGTTTGAAGGCCTGTTTAGATGATTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTATACCGGTCACCAGAAACTACTATACGTATGACGAACATGTTAGAGATACTGATGCGCTTGAAAAATGTGAAGAACTTAGATCCAAGACATAGCACTTTGGTGGAAAATGCATATTACCTTTGTAAGCCTCCAGAAAGATCTGCACGAGTGGCTAAAGTCCGTCCACCATTGCATCAGGTCTATAAAGGGAAATATGGCCAGATCCATCTGATTGCTTCTCTTGCTGCTGGTTTAAGTCGCTACCATGATGAGTTTGCAGTGGCTATAGTTGATGAGGTTTTGGAGGAGATTAGAGTTGGGCTGGAACTAAATGACTATGGGATGCAGCAAAGACGCATTGCCTACATGAGATTCTTAGGGGAGCTTTACAACTATGAGCATGTGGATTCATCTGTTATTTTTGAGACACTATATCTTATCGTCATCTATGGCCATGGGACACCAGAGCAAGATGCACTGGATCCACCTGAAGATTGTTTTCGTATAAGATTGATCATTACTCTTCTTGAAACCTGTGGACATTACTTTGATCGTGGCTCTTCAAAGAGGAAACTTGATCGATTCCTTATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGCCTCTCGACATTGAATTTGACTTGCAGGATCTGTTTGCGGAGTTGCGCCCCAATATGGTTAGATATACATCTGTTGATGAAGTGAATGCAGCTCTAGTAGAACTTGAAGAACATGATCGGATGGTTTCTGCTGATAAGGCCAGTAGTGAAAAACATTCTGATACTGAGAAGCCTTTGAGTAGGACTAGTTCTAACACAGTGGTAAGCAATGGACAACGCATTGATAATGGTGCAGAAGAGAATGGAGTGCAAGATGATGTTAATGACAGTGACACTGACTCAGGGAGTGGCACCATTGATGCGGAGGGACATGATGATGAAGAGTTGGATGATGAGAATCATGACGATGGATGTGAGACTGAGGATGATGATGATGATGATGATGATGGGCCTGGACCTGCTTCTGATGAGGAAGACGAAGTCCATGTGAGACAAAAGGTGACAGAGGTGGACCCTCTGGAGGAAGCCAATTTTGAACAGGAGCTGAAGGCTGTGTTACAGGAGAGTATGGAACAGCGAAGGCAGGAGCTACGAGGCCGTCCTACATTGAACATGATGATTCCAATGAATGTATTTGAGGGATCCACTAAGGATCATCATGGGAGAGGAGTTGGTGGTGAAAGTGGTGATGAGGCATTGAGTGAGGAGACCGGTGGAAACAAAGAGGTTCAAGTGAGAGTTCTTGTGAAGCGTGGGAACAAGCAGCAAACAAAACAGATGTACATCCCACGGGATTCCTCACTGGTTCTGAGTACAAAACAGAAAGAAGCAGCTGAGCTTCAAGAGAAAGAAGACATTAAGAGGCTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGACTAGGGTCCCAACCAACAAATTGGATGTTGAGTGGCGGCAACAGGACTGGTGGCCGTGGCAACACTTTGGAAGGAACCAGCAGTAGGAGTGGCGGACGGCATCGGCATCACAATTATACTGGCAGTGGCATCTACTACGGCAGGAGGAGGTAA 3414 0.4265 MEPQPEEAVARLEELQKSIEAKMTLRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQINEEQRETLMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQVCSLLHQRYKDFAPCLIQGLLKVFSPGKPGDESDADRNLKAMKKRSTLKLLLELYFVGVIDDGNIFMNIIKDLTGMDQLKDRDAAQTSLTLLSSFARQGRIFLGLPVSGPEIHEEFFKGLNITADQKKVFRKACYAFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNISSLAEALDMQPPVMPEDGHTTRVTTGEEATSAGGKDSSIAEPVWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKTSEQSVKSQDQPTEIVPESDKGQLGNHDSGDASAESIALPEGGSAEKAKDKEEREKSKELEREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMTNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLIVIYGHGTPEQDALDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFAELRPNMVRYTSVDEVNAALVELEEHDRMVSADKASSEKHSDTEKPLSRTSSNTVVSNGQRIDNGAEENGVQDDVNDSDTDSGSGTIDAEGHDDEELDDENHDDGCETEDDDDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEANFEQELKAVLQESMEQRRQELRGRPTLNMMIPMNVFEGSTKDHHGRGVGGESGDEALSEETGGNKEVQVRVLVKRGNKQQTKQMYIPRDSSLVLSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGSQPTNWMLSGGNRTGGRGNTLEGTSSRSGGRHRHHNYTGSGIYYGRRR 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02777 1137 SUPERFAMILY ARM repeat 64 176 IPR016024 -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 863 881 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 845 862 - -
Aip03g02777 1137 Pfam MIF4G domain 661 817 IPR003890 GO:0003723|GO:0005515
Aip03g02777 1137 Pfam MIF4G domain 461 645 IPR003890 GO:0003723|GO:0005515
Aip03g02777 1137 Coils Coil 529 549 - -
Aip03g02777 1137 Coils Coil 416 445 - -
Aip03g02777 1137 SUPERFAMILY ARM repeat 455 650 IPR016024 -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 1087 1115 - -
Aip03g02777 1137 Gene3D - 2 309 - -
Aip03g02777 1137 SUPERFAMILY ARM repeat 659 841 IPR016024 -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 845 959 - -
Aip03g02777 1137 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 7 661 IPR039762 GO:0000184
Aip03g02777 1137 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 662 1136 IPR039762 GO:0000184
Aip03g02777 1137 MobiDBLite consensus disorder prediction 940 959 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 1084 1137 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 412 449 - -
Aip03g02777 1137 Gene3D - 645 846 - -
Aip03g02777 1137 Gene3D - 473 644 - -
Aip03g02777 1137 Pfam Up-frameshift suppressor 2 940 1076 IPR007193 -
Aip03g02777 1137 PANTHER - 662 1136 - -
Aip03g02777 1137 PANTHER - 7 661 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 999 1023 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 302 335 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 366 449 - -
Aip03g02777 1137 SMART if4_15 47 269 IPR003890 GO:0003723|GO:0005515
Aip03g02777 1137 SMART if4_15 649 822 IPR003890 GO:0003723|GO:0005515
Aip03g02777 1137 SMART if4_15 458 646 IPR003890 GO:0003723|GO:0005515
Aip03g02777 1137 MobiDBLite consensus disorder prediction 369 384 - -
Aip03g02777 1137 Gene3D - 1030 1054 - -
Aip03g02777 1137 MobiDBLite consensus disorder prediction 907 939 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02777 K14327 - gmx:100786092 1920.59