Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02773 ATGTCCACCTCTGATCCCAACAAGTTGATAACCAAAGCTGATAAGCTAACAAAACTCGGTTTCACAAGGTGGACTGCGGATTGGAGAAGTGCTACAGTTCTTTATGAGCAGGCTGCTAATGCATTTAGACTTGCCAAGGACTACGAGAAAGCCAAAACAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCATGGGATGCCGCTAAGCACATGGAGTCTGCTGCTGCGTTAGCAAAGGAACTAAGCAACTGGAGAGAAGTTGCCGATTTCTATCGTAGGGCATCTGAATTGTACATTGAGTGTGGGAGACCACAGCCTGCATCCGACGCCCTTGCCAAGGGAGCCCGTGCATTGGAAGATACCATGCCTGAAGAAGCCATTCAGCTATATACAGATGCTTGTACAGTTCTTGAAGAGGATGAAAGAGAACAAATGGCATTTGATTTGTATCGTGCTGCAGCCAATGTTTATATAAAACTTGAGAAATATACAGACGCCGCATCTCTCATGTTGAAATTGGGCTTGGCAGCTGAGAAGTCTAATGCTATCAATAGCCAATGCAAGGCATATCTTAGTGCGGTTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTACAATGACTGTTCCCAGGTTGATGCTTTCCTCAGCAGCGACCAGAACCGTTGTGCTAGCAAGCTTCTTGCTGCTTACACAGATGGAGATGTTGAAGAAATCAAACGTGTTGCTCAGTCGAGCACTATTTCACATCTTGACCATGTGATCATTAAGCTTGCAAGGAAACTCCCAACAGGCGATGTGAGCGCACTAAAGGGCAGAACTGCTGAAGGGGAAGAAGCACCACTTGATGAAAACGATCTGACATAA 891 0.4501 MSTSDPNKLITKADKLTKLGFTRWTADWRSATVLYEQAANAFRLAKDYEKAKTAYEKASKGQEMLSSPWDAAKHMESAAALAKELSNWREVADFYRRASELYIECGRPQPASDALAKGARALEDTMPEEAIQLYTDACTVLEEDEREQMAFDLYRAAANVYIKLEKYTDAASLMLKLGLAAEKSNAINSQCKAYLSAVIIYLYAHDFKQAEKCYNDCSQVDAFLSSDQNRCASKLLAAYTDGDVEEIKRVAQSSTISHLDHVIIKLARKLPTGDVSALKGRTAEGEEAPLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02773 296 Pfam Soluble NSF attachment protein, SNAP 5 266 - -
Aip03g02773 296 Gene3D Tetratricopeptide repeat domain 1 272 IPR011990 GO:0005515
Aip03g02773 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 3 283 - -
Aip03g02773 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 3 283 IPR000744 GO:0006886
Aip03g02773 296 SUPERFAMILY TPR-like 6 250 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02773 Aip-Chr3 56624611 56631561 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02773 K21198 - gmx:100790986 509.22