Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02749 ATGCCTCCATTACGCTCCAGTGGATTTGTTGATCCCGGTTGGGATCATGGTATTGCCCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTATTGTGGGAAAATAGTTAGTGGTGGCATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATATTGTGAAAAGGCTCCTGAGGAAGTCTACTTAAGAATGAAGGAAAACCTGGAAGGGTGTCGATCCAACAAGAAACAGAAGCACATTGATGCTCAAGCATATATGAATTTTCAGTCTAATGATGATGAAGATGATGAAGAGCAAATTGAGTGTAGAAGCAAAGGGAAGCAGTTGATGGATGATAGAAGTGTATCTATAAACTTTACACCTCTTCGTTCATTAGGATATGTTGACCCAGGGTGGGAACATGGTGTTGCTCAAGATGAGAGAAAGAAGAAAGTGAAATGCAACTATTGTGAGAAAATTGTTAGTGGAGGTATTAATCGGTTTAAACAGCATCTGGCTAGAATTCCTGGAGAGGTAGCACCTTGTAAAAATGCTCCTGAAGAAGTTTATCTTAAGATTAAAGAGAATATGAAATGGCATCGCACTGGAAGGAGACATAGGCAACCTGAGGCTAAGGAGTTGATTCCTTTCTATGCAAAATCAGTTGATGATGATGATGATGATGATGGTGATGAAGAAGATGAATATGAGCAGATGGAAGATGCTTTGCATCATGTGAACAAGGAAACATTGATTGATGTTGATAACAGATTGTCTAAAGACTTTAGGAAGACCTTCAAGGCAATGCCGCCAAGTACTGGTCCTGAACCTGTATTGAGAAGATCTAGGTTGGATAACATATACCTGAAACTGCCCAAGAATCAGCCTCCTCAAGCTTTCAATCAAGTCAAAGTTAAGGCTGGGCCCACTAAAAAATTGCGCAAGGAAGTCATTTCTACAATTTGCAAGTTCTTTTACCATGCTGGGATTCCTTTACAGGCTGCAGACTCCTTATATTTTCATAAAATGCTTGAAGTTGTTGGTCAATATGGACAGGGACTGGTATGTCCACCAAGCCAACTTATGTCTGGTCGCTTTTTGCAGGAGGAAATAGATTCCATTAGGAATTATCTCGTCGaatacaaggcttcctgggcaattactggttgttctgtaatggcagatagttggagagatgtacagggaaggacaattattaactttcttgtttcttgtcctcatggcgtatactttgtttcttcagttgatgctactaatgtagtagaagatgcACCAAATCTATTCAAGCTTCTGGACAAGGTGGTGGAGGAAATAGGTGAGGAAAATGTGGTGCAGgtcataactgaaaatactcccaactataaagctgctgggaaaatgcttgaagagaagcgaaggaatttattttggactccttgtgccacttattgtattaatcgaattctagaagatTTTATGAAGATAAGATGTGTGGAAGAGTGCATTGAAAAAGGCCAGAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAATGAATTTACTGAGGGGCAGGAGCTTTTAAACACAGCTGGGACACAGTATGCCTCTAGCTTTGCTACATTGCGGAGCTTGTTGGATCATAGAGTTGGGCTCAAAAGAATGTTTCTATCAAACAAATGGATTTCATCCAGGTTCTCCAGGACAAATGAGGGGAAAGAGGTGGAAAAAATTGTCTTGAATGTCACGTTTTGGAAGAAAATGCAGTATGTTAGAAAGTCAGTAGATCCCATCATGCATGTACTTCAAAAGGTTTGTAGTGGTGAGAGCTTCTCAATGCCATACATATATAATGACATGTACCGAGCAAAACTTGCAATCAAATCTGTTAATGGTGATGATGCACGTAAATATGAACCATTCTGGAAGGTGATAGACAATCATTGTAACTCTCTGTTTTGTCACCCACTTTACTTGGCTGCGTACTTCTTGAATCCCTCCTACAGGTATCGGCAAGATTTTGTGGCGCATTCTGAGGTAGTCCGGGGGCTCAATGAATGTATTGTTCGGCTAGAGCCAGACAATATGAGACGGATATCTGCATCAATGCAGATTGCTCATTATAATTCTGCACAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGATCTTGAACCAGCTGCGTGGTGGCAACAACATGGAATAAGCTGCATAGAGTTGCAAAGAATAGCTGTGCGCATATTAAGTCAGACATGCTCAACCTTTGTGCGTGAGCATGAGTGGAGTATATATGATCAGATATACAGTAAAAGTCAAAATCGTCTAACACAGAAGAAACTGAATGACCTTATCTACGTGCACTACAACTTGCGACTTAGAGAATCCCAATTAAGAAAAAGGTCTAGGGACTCGAGGTCAACCTCTGTTGACAATGTTCTGCTAGAGCACTTACTCAAGGATTGGATAACGGACACCAATATACAAAGCTCTGATGTTGATAAGAACATCTTTGATGGAATTGAACACGATGATCAATATGAAAATGATTTAATTGATTATGATGATGGAGCTGCACGATCTTTGAAGGGATCGCTTGAGCTGGAAACTATGGCTGATTTAGCAGTAGGATCACCAGATGTAGACCATGCTAACATTAATGCTGCCACTGACAATGACTCTGATCTTAATTATTTTGATGATGATTTGAGCGAGTAA 2730 0.3597 MPPLRSSGFVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLRMKENLEGCRSNKKQKHIDAQAYMNFQSNDDEDDEEQIECRSKGKQLMDDRSVSINFTPLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKIVSGGINRFKQHLARIPGEVAPCKNAPEEVYLKIKENMKWHRTGRRHRQPEAKELIPFYAKSVDDDDDDDGDEEDEYEQMEDALHHVNKETLIDVDNRLSKDFRKTFKAMPPSTGPEPVLRRSRLDNIYLKLPKNQPPQAFNQVKVKAGPTKKLRKEVISTICKFFYHAGIPLQAADSLYFHKMLEVVGQYGQGLVCPPSQLMSGRFLQEEIDSIRNYLVEYKASWAITGCSVMADSWRDVQGRTIINFLVSCPHGVYFVSSVDATNVVEDAPNLFKLLDKVVEEIGEENVVQVITENTPNYKAAGKMLEEKRRNLFWTPCATYCINRILEDFMKIRCVEECIEKGQKITKLIYNQIWLLNLMKNEFTEGQELLNTAGTQYASSFATLRSLLDHRVGLKRMFLSNKWISSRFSRTNEGKEVEKIVLNVTFWKKMQYVRKSVDPIMHVLQKVCSGESFSMPYIYNDMYRAKLAIKSVNGDDARKYEPFWKVIDNHCNSLFCHPLYLAAYFLNPSYRYRQDFVAHSEVVRGLNECIVRLEPDNMRRISASMQIAHYNSAQDDFGTELAISTRTDLEPAAWWQQHGISCIELQRIAVRILSQTCSTFVREHEWSIYDQIYSKSQNRLTQKKLNDLIYVHYNLRLRESQLRKRSRDSRSTSVDNVLLEHLLKDWITDTNIQSSDVDKNIFDGIEHDDQYENDLIDYDDGAARSLKGSLELETMADLAVGSPDVDHANINAATDNDSDLNYFDDDLSE 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02749 909 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Aip03g02749 909 PANTHER OSJNBA0013A04.12 PROTEIN 45 844 - -
Aip03g02749 909 PANTHER OSJNBA0013A04.12 PROTEIN 11 49 - -
Aip03g02749 909 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 49 - -
Aip03g02749 909 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 45 844 - -
Aip03g02749 909 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Aip03g02749 909 SUPERFAMILY Ribonuclease H-like 379 797 IPR012337 -
Aip03g02749 909 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Aip03g02749 909 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Aip03g02749 909 Pfam Protein of unknown function (DUF 659) 354 505 IPR007021 -
Aip03g02749 909 Pfam hAT family C-terminal dimerisation region 723 795 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02749 Aip-Chr3 54310363 54315797 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02749 - - aip:107630570 1831.61