Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02710 ATGACAACTACTAGAACTCTTTCAAGATGGCATCACCATCAAAGCCTAGTGGATTCAGGGAACAACAACTACATAGATACTGTTCCGGAGAACAGAGCTAATTACAAACCATATGGGCAAAATGGGTATTTTAAAGAACCCACAGGACGTTTCTCAGATGGCCGTGTTATTGTGGATTTTATAGGTGAGTATGAAAAGCTGCCACTAGTCCCTGCATTTTTACAGCCAAATGCTGATTATACCAATGGTGTCAACTTTGCTTCTGGTGGGGCTGGTGTTCTTGCTGAAACCAATCAGGGAATGGTGATTGATCTTCCAACACAACTAAGGAACTTTGAAGAGGTGAGAGTGTCACTATCAGAAAAGCTTGGGGAGAAGAAGGCAAAGGAGTTAATCTCAGAAGCAATTTATTTCATTAGCATAGGTAGCAACGATTACATGGGTGGTTATTTGGGTAACCCCAAAATGCAAGAAAGCTACAACCCTGAACAATATGTGGGGATGGTCATTGGAAACTTGACACAAGCAATCCAAGTACTATATGAGAAAGGGGCTAGAAAATTTGGATTTTTAAGTTTGTCTCCATTGGGATGCTTACCAGCCCTCAGAGCTCTAAACTCAAAATCCGACAAAGGTGGCTGCTTTGAAGCAGCTTCTGCTCTTGCTCAAGCTCATAATCATGCTTTGAGTAGTGTTCTCAAAAGCCTTGAGCAAATCCTTGAAGGGTTTAAGTATTCTAACTCCAATTTCTACGATTGGCTTCAAGAGAGAATAAGTAACCCCACCAATCATGGTTTTAAGGATGGAATCAATGCTTGCTGCGGAAGTGGGGCATATGGGGGTGTTTTCAGTTGTGGAGGCACCAAAGAAGTTGAAGATTACGAATTGTGTGAAAATGTTGGTGACTACGTATGGTGGGATTCATTCCACCCAACAGAGAAGATCCATGAGCAATTTGCCAAAACTTTATGGAATGGACCACATTCCTCAGTTGGACCCTATAATTTAAAGAGACTCTTCTCTAACATTAAGGTAATCAAGGCCCGCACTATAGCTGATGTAGTTGACAGACAAGAGACCGGTGAGCAAGGAATATTTCAGCAGTGA 1107 0.4182 MTTTRTLSRWHHHQSLVDSGNNNYIDTVPENRANYKPYGQNGYFKEPTGRFSDGRVIVDFIGEYEKLPLVPAFLQPNADYTNGVNFASGGAGVLAETNQGMVIDLPTQLRNFEEVRVSLSEKLGEKKAKELISEAIYFISIGSNDYMGGYLGNPKMQESYNPEQYVGMVIGNLTQAIQVLYEKGARKFGFLSLSPLGCLPALRALNSKSDKGGCFEAASALAQAHNHALSSVLKSLEQILEGFKYSNSNFYDWLQERISNPTNHGFKDGINACCGSGAYGGVFSCGGTKEVEDYELCENVGDYVWWDSFHPTEKIHEQFAKTLWNGPHSSVGPYNLKRLFSNIKVIKARTIADVVDRQETGEQGIFQQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02710 368 Gene3D SGNH hydrolase 14 327 IPR036514 -
Aip03g02710 368 SUPERFAMILY SGNH hydrolase 81 325 - -
Aip03g02710 368 CDD SGNH_plant_lipase_like 15 327 IPR035669 -
Aip03g02710 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 14 354 - -
Aip03g02710 368 PANTHER - 14 354 - -
Aip03g02710 368 Pfam GDSL-like Lipase/Acylhydrolase 15 321 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02710 Aip-Chr3 53000554 53009634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02710 15 340 Acyl Lipid Metabolism Gene Families AT4G10950 30.330 5.46e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02710 - - aip:107630589 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02710 03 53000554 53009634 Aip03g02710 03 53000554 53009634 ECH