Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02705 ATGGCTTTGACTCGCTCTCACTCTCTCAAGGAGAGGCTCGATGAGACTCTTGCTGGACAGAGGAATGAGATTTTGGCCCTTCTTGCTAGGATCGAGGCTAAGGGCAAGGGAATCCTGCAGCATCACCAGGTCATTGCTGAGTTTGAAGAAATCCCTGAAGAGAAGAGGCAGAAGCTATATGATGGTGCCTTTGGAGAAGTTCTGAGATCTACTCAGGAAGCCATAGTGCTGCCACCATTTGTTGCTTTGGCAGTTCGTCCAAGGCCTGGTGTTTGGGAGTACCTGCGCGTGAATGTGCACGCGCTTGTTGTTGATGAGTTGCGTCCTGCTGAGTACCTCAAGTTCAAGGAAGAGCTTGTTGATGGCAGTTCCAACGGCAACTTTGTGCTTGAGTTGGACTTTGAGCCTTTTAACGCATCCTTCCCCCGCCCAACACTTAACAAGTCAATTGGGAATGGCGTTGAGTTCCTTAACCGCCACCTTTCCGCTAAGCTTTTCCATGGCAAGGAGAGCATGCAGCCATTGTTGGAGTTCCTAAGGCTTCATAGTTACAATGGAAAGACTATGATGTTGAATGACAGGATTCAAAACCTGAATTCTCTTCAACATGTTCTGAGAAAGGCAGAGGACTATCTGGTTACACTTGCTCCCGAAACACCCTACTCAGTATTCGAGCACAAATTCCAGGAGATAGGTTTGGAGAGAGGGTGGGGTGACACCGCCGAGCGTGTCCTCGAGATGATCCAGCTTCTCCTGGATCTCCTCGAGGCACCTGACCCTTGTACCCTGGAGACATTCCTTGGAAGGATCCCTATGGTCTTCAATGTGGTGATCCTTTCTCCCCATGGTTACTTTGCTCAAGACAATGTCTTGGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCATTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCTTGGACATCACCCCTCGCATTCTCATTCTCACCCGGCTTCTCCCTGATGCTGTTGGAACTACTTGCGGCCAACGGCTTGAGAAGGTATTCGGCACTGAGCATTGCCACATTCTTCGAGTTCCCTTTAGAACAGAGAAAGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTAGAAACTTACACTGAGGATGCTGCTCATGAACTTGCCAAAGAGTTGAAAGGCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTCTGTTAGCACACAAATTGGGTGTAACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATATCCAGAATCTGACATTTACTGGAAGAAATTTGATGACAAATATCACTTCTCATGCCAATTCACAGCTGATCTTTTTGCAATGAACCACACAGATTTCATCATCACCAGTACCTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTGGACAATATGAGAGCCACACTCACTTCACCCTTCCTGGACTCTACCGTGTTGTCCACGGCATTGATGTCTTCGATCCAAAGTTTAACATTGTCTCTCCTGGTGCCGACATGAGCATTTACTTCCCATACACTGAAACCGAGCGCAGGTTGACATCCTTCCACCCGGAGATTGAAGAGCTACTGTATAGCAATGTAGAGAACGAGGAGCACATATGTGTACTGAAGGATCGTACCAAGCCAATTATCTTCACCATGGCGAGGTTGGACCGTGTGAAGAACATCACAGGACTTGTTGAGTGGTATGGCAAGAACGCCCGCCTTAGGGAGCTCGTGAACCTTGTCGTGGTAGCCGGAGACAGGCGGAAGGAGTCCAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGGCCTCATTGAGACTTACAAGCTAAACGGCCAATTCAGGTGGATCTCCTCACAAATGAACAGAGTGAGGAATGGAGAGCTTTACCGTGTGATCTGCGACACCAAAGGTGCGTTCGTGCAGCCTGCGATCTACGAAGCGTTCGGTCTGACAGTTGTTGAGGCCATGACTTGTGGATTGCCAACATTTGCAACTTGCAATGGTGGTCCTGCTGAGATCATTGTCAATGGAAAATCTGGCTACCATATTGATCCTTACCATGGTGATCGTGCTGCTGAGATTCTTGTTGATTTCTTCGAGAAGAGCAAGGCTGATCCATCTCACTGGGACAAGATCTCTCAGGGTGGTCTCAAGCGTATTCATGAGAAGTATACGTGGCAAATTTACTCCGACCGCCTGCTGACTCTCACTGGAGTCTACGGCTTCTGGAAGCATGTGACCAACCTTGACCGCCGCGAGAGCAAGCGTTACCTTGAGATGTTCTATGCCCTCAAATACCGCATGCTGGCTGAGTCTGTGCCCCTTGCTGTCGAGTAA 2409 0.4828 MALTRSHSLKERLDETLAGQRNEILALLARIEAKGKGILQHHQVIAEFEEIPEEKRQKLYDGAFGEVLRSTQEAIVLPPFVALAVRPRPGVWEYLRVNVHALVVDELRPAEYLKFKEELVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHGKESMQPLLEFLRLHSYNGKTMMLNDRIQNLNSLQHVLRKAEDYLVTLAPETPYSVFEHKFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILILTRLLPDAVGTTCGQRLEKVFGTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAHELAKELKGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFDDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTHFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETERRLTSFHPEIEELLYSNVENEEHICVLKDRTKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVNGKSGYHIDPYHGDRAAEILVDFFEKSKADPSHWDKISQGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYRMLAESVPLAVE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02705 802 TIGRFAM sucr_synth: sucrose synthase 21 799 IPR012820 GO:0005985|GO:0016157
Aip03g02705 802 Gene3D Glycogen Phosphorylase B; 524 750 - -
Aip03g02705 802 PANTHER SUCROSE SYNTHASE 3 802 - -
Aip03g02705 802 Pfam Sucrose synthase 5 550 IPR000368 GO:0005985|GO:0016157
Aip03g02705 802 Coils Coil 10 30 - -
Aip03g02705 802 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 292 760 - -
Aip03g02705 802 Gene3D - 22 142 - -
Aip03g02705 802 PANTHER - 3 802 IPR012820 GO:0005985|GO:0016157
Aip03g02705 802 Pfam Glycosyl transferases group 1 561 735 IPR001296 GO:0016757
Aip03g02705 802 Gene3D - 143 272 - -
Aip03g02705 802 Gene3D Glycogen Phosphorylase B; 277 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02705 Aip-Chr3 52788725 52794588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02705 2 802 Glycosyltransferase AT3G43190 84.769 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02705 K00695 - gmx:100806761 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02705 03 52788725 52794588 Aip03g02705 03 52788725 52794588 ECH