Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02639 ATGGGTTCGGAGGACAAAGGGTTGGGGTTCTTTAAGGAGATCGGTTTGGCTTCCAACAATATTGGCTCTTACATTAACGGCCAATGGAAGGCCAACGGTTCTTCAACCACTTCTCTTAATCCTTCTAACAATCAGGCTATTGCTCAAGTGACCGAACCAACTTTGCAAGATTATGAGGAGGGATTGAATGCTTGCAATGAAGCAGCTAAAATATGGATGACAGTTCCAGCGCCTAAGAGAGGTGAGATTGTAAGACAGATTGGTGAAGCATTAAGGGCTAAGTTGGAGCCTCTTGGTAAATTGGTGTCTCTTGAGATGGGAAAAATTCTTCCCGAAGGAATCGGGGAGGTTCAGGAAATTATCGACATGTGTGATTATGCTGTTGGGCTAAGCAGGCAATTGAATGGACAAATTATACCATCAGAACGTCCAGACCACATGATGCTTGAGACATGGAACCCACTGGGAATAGTTGGCGTGATAACTGCTTTCAACTTTCCATGTGCTGTTCTAGGGTGGAATGCTTGCATTGCATTAGTCTGTGGTAACTGTGTTGTCTGGAAGGGCGCTCCAACAACTCCATTGATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAAGAACAACTTGCCTGGTGCAATATTCACCTCTTTCTGTGGAGGTGCGGAAATTGGTCAGGCAATAGCAAAAGACACGCGCATTCCCCTGGTCTCATTTACTGGAAGTACAAAGGTCGGCTTGATGGTCCAGAAAATAGTTAATGAAAGATTTGGCAAATGCCTGCTTGAGCTAAGTGGTAACAATGCAATTATAGTCATGGATGATGCAGACATCAAACTTGCTGTGCGCTCTATTCTGTTTGCTGCTGTAGGAACTGCTGGTCAGCGTTGCACAACATGCCGTAGACTGTTTGTGCATGAGAGTATTTACAAAGATGTACTAGATCAACTTGTTGAAGTCTACAAACAAGTAAAAATTGGGGACCCCCTCGAGAAAGGGACTCTAGTTGGCCCCTTGCATACTCGTTCTTCAGTGGAAAACTTCAAGAATGGTATTTCAGCCATAAAATCACAGGGAGGGAAGATCTTAACAGGTGGGTCCATAGTAGATTCGGAAGGAAATTTTGTACAACCGACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAGGAATTGTTTGGTCCAGTACTATATGTTATGAAATTTCAGACTCTAGAAGAAGCAATTATCTTGAACAATTCTGTTCCTCAAGGGCTGAGTAGTTCAATCTTCACAAGACGACCTGAAGCTATATTCAAGTGGATTGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGTAAACATACCGACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCGACCGGCGGTGGTCGTGAAGCAGGAAGTGACTCTTGGAAGCAATACATGCGCCGTTCTACATGTACCATCAATTATGGAAGTGAACTCCCATTAGCTCAGGGAATAAACTTTGGCTAG 1527 0.4388 MGSEDKGLGFFKEIGLASNNIGSYINGQWKANGSSTTSLNPSNNQAIAQVTEPTLQDYEEGLNACNEAAKIWMTVPAPKRGEIVRQIGEALRAKLEPLGKLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGQIIPSERPDHMMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGQAIAKDTRIPLVSFTGSTKVGLMVQKIVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFVHESIYKDVLDQLVEVYKQVKIGDPLEKGTLVGPLHTRSSVENFKNGISAIKSQGGKILTGGSIVDSEGNFVQPTIVEISPDAPVVKEELFGPVLYVMKFQTLEEAIILNNSVPQGLSSSIFTRRPEAIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02639 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Aip03g02639 508 SUPERFAMILY ALDH-like 20 497 IPR016161 GO:0016491
Aip03g02639 508 CDD ALDH_F7_AASADH 24 496 - -
Aip03g02639 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 485 IPR016162 GO:0016491
Aip03g02639 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 IPR044638 GO:0004029
Aip03g02639 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
Aip03g02639 508 Pfam Aldehyde dehydrogenase family 33 488 IPR015590 GO:0016491
Aip03g02639 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02639 Aip-Chr3 49236929 49242621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02639 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 80.118 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02639 K14085 - gmx:100811186 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02639 03 49236929 49242621 Aip03g02639 03 49236929 49242621 ECH