Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02619 ATGGCGTGCTCATCGTCAACGCCGGCGGCGTGGTGGTTCACCATCGCGGTATTGTTCTTTGTCGTCGCCGCCGCATCGGCCGGGTGGAGCTCCGATGATCCGAACCCAATCCGAATGGTGCCGGACGAGCTCCGAGAAGTGGAGGCGGAGGTGGTTAGGGTCGTCGGGCGAACCCGGCACGCTCTCTCTTTCGCTCGGTTCGCCGTCAGGCATGGAAAACGATATGAGAGTCCCGAAGAGCTGAAGATGCGATTTGAAGTGTTCTCTGAGAACAAGAGGCTCATAAGATCTACTAACAGAAAGCGATTGTCGTACACTCTCGCCGTTAACCATTTTGCTGATTGGACTTGGGAGGAGTTCAAAAGACACAGACTAGGCGCAGCACAAAATTGCTCTGCTACCCTTAAGGGCAATCATAAGCTTACTGAAGCTGTTCTTCCTGAGACGCAAGACTGGAGAAAAGAAGGTATTGTTAGCCCAGTCAAAGATCAAGGCTCCTGTGGATCTTGCTGGACATTCAGCACAACTGGAGCTTTGGAAGCAGCCTATGCACAAGCGTTTGGAAAGAGCATCTCTCTTTCTGAGCAGCAGCTAGTGGATTGTGCTGGTGCTTTCAATAACTATGGTTGTAATGGTGGGTTGCCATCCCAAGCTTTTGAATACATCAAATACAGTGGTGGACTTGACTCAGAGGAAGCATATCCCTATACCGCGAAGAATGGTGTCTGCAAATTCAATGCTGAAAATGTTGCTGTTCAAGTCCTTGACTCTGTCAATATTACTTTGGGTTCTGAGGATGAATTAAAGCATGCAGTTGCTTTTGTTCGGCCAGTTAGTGTGGCATTTCAGGTGGTTGATGGTTTCCGATTCTATAAGGATGGTGTTTACACTAGTAACACTTGCGGTAGCACATCCCAGGATGTAAACCATGCTGTTCTCGCTGTTGGGTATGGTGTTGAAAATGGTGTCCCATATTGGCTTATTAAAAATTCATGGGGAAAATCATGGGGTGACGATGGTTACTTCAAGATGGAGCTGGGGAAGAATATGTGCGGTGTTGCTACTTGTGCCTCGTATCCAATTGTGGCTTAG 1092 0.4844 MACSSSTPAAWWFTIAVLFFVVAAASAGWSSDDPNPIRMVPDELREVEAEVVRVVGRTRHALSFARFAVRHGKRYESPEELKMRFEVFSENKRLIRSTNRKRLSYTLAVNHFADWTWEEFKRHRLGAAQNCSATLKGNHKLTEAVLPETQDWRKEGIVSPVKDQGSCGSCWTFSTTGALEAAYAQAFGKSISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKYSGGLDSEEAYPYTAKNGVCKFNAENVAVQVLDSVNITLGSEDELKHAVAFVRPVSVAFQVVDGFRFYKDGVYTSNTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGKSWGDDGYFKMELGKNMCGVATCASYPIVA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02619 363 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 360 - -
Aip03g02619 363 SUPERFAMILY Cysteine proteinases 59 361 IPR038765 -
Aip03g02619 363 SMART Inhibitor_I29_2 64 120 IPR013201 -
Aip03g02619 363 SMART pept_c1 146 361 IPR000668 GO:0006508|GO:0008234
Aip03g02619 363 Gene3D Cysteine proteinases 55 362 - -
Aip03g02619 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 308 318 IPR025660 -
Aip03g02619 363 Pfam Cathepsin propeptide inhibitor domain (I29) 64 120 IPR013201 -
Aip03g02619 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 325 344 IPR025661 -
Aip03g02619 363 PRINTS Papain cysteine protease (C1) family signature 164 179 IPR000668 GO:0006508|GO:0008234
Aip03g02619 363 PRINTS Papain cysteine protease (C1) family signature 310 320 IPR000668 GO:0006508|GO:0008234
Aip03g02619 363 PRINTS Papain cysteine protease (C1) family signature 325 331 IPR000668 GO:0006508|GO:0008234
Aip03g02619 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 164 175 IPR000169 -
Aip03g02619 363 Pfam Papain family cysteine protease 146 361 IPR000668 GO:0006508|GO:0008234
Aip03g02619 363 CDD Peptidase_C1A 147 360 IPR039417 -
Aip03g02619 363 PANTHER THIOL PROTEASE ALEURAIN 29 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02619 Aip-Chr3 48233123 48237011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02619 K01366 - jre:109008520 585.489