Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02554 ATGGAGTGCCTTGGAGCGAGAAACTTCGCGGCAATGTCGGTTTGTTTAAGCTCTTCTTCGAGGTCGCGTTTGAGGAGGAAGAAGCTAGCCAGAATCCGAACCTCAATCTGCATTCGTGGAATTAGTTTGCACCGTCATCACCACCATGATGATGATCATTATCGTGAAGCTTCACGCTCGCAATGTCTCAGCGTGGAGGCCAAAGCTGGTGCCGGAAGCGAGAGCTGCGTGGCGACGAAGGAGGACTTCGCCGACGAAGAAGATTATATCAAGGCCGGTGGATCGGAACTCGTGTTCGTCCAAATGCAGCAGAACAAGTCCATGGAAATGCAATCCAAGCTTGCTGATAAGTTGCCACCCATATCTGTAGGAGATGTATTGGATCTAGTGGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCAGAATCTGCCAAGTTAGGATTGAAAGTGGGGCTCATTGGTCCGGATCTTCCTTTTACAAATAATTATGGTGTGTGGGAAGATGAATTTAAAGATCTTGGACTTGGAGGTTGTATTGAGCATGTTTGGAAGGATACCATTGTATATCTTGATAATAAGGATCCCATTTTTATTGGACGTTCTTATGGACGTGTCAGTCGACATTTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTATCATATCTTAGCTCAAGAGTTGAAAGGATTGTTGAGGGTAGCAATGGCCACAGTAATGTCATCTGTGAATATGATATTGTGGTGCGCTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAAGTTGGGGGTCCAAAGGTGTCTGTCCAGACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAGTCCTTATGATCCCAACCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAAACTCTAGAAGCAAATTACCCAACATTTCTTTATGCAATGCCCATGTCTGGCACAAGAGTGTTCTTTGAGGAAACCTGTTTGGCGTCGAAAGATGCCATGCCTTTTGAGTTATTAAAGAAAAAGCTTTTTTCGAGATTAAATACAATGGGGATCCGAATTACAAAGACTTATGAAGAGGAATGGTCTTATATCCCCGTTGGTGGGTCCCTACCCAACACAGAGCAGAAGAACCTTGCATTTGGTGCAGCTGCTAGTATGGTGCATCCAGCTACAGGCTACTCAGTTGTGAGATCTTTGTCGGAAGCTCCAAAATATGCTTCAGTAATTGCCTCTATTTTGAAAGAGGGTCATACAAGTAGCATTATTACTCATGAACGAAGTAAAGAGAATCTATCTATGCAAGCTTGGAATACCCTTTGGCCACAAGAAAGGAAACGACAGAGAGCATTCTTTCTTTTTGGATTAGCATTAATTCTGCAGCTTGACATTGAGGGCATCAGAACCTTCTTTCATACTTTCTTTCGCTTACCTAATTGGATGTGGCAAGGATTTCTTGGCTCCTCTCTCTCCTCTACAGACCTAGTACTATTTGCATTCTACATGTTCATAGTAGCACCAAATAACTTGAGAATGTGCCTAGTCAGACATCTGCTTTCGGATCCTACAGGGACAACAATGGTAAGGACCTACTTAACGATATAG 1647 0.4396 MECLGARNFAAMSVCLSSSSRSRLRRKKLARIRTSICIRGISLHRHHHHDDDHYREASRSQCLSVEAKAGAGSESCVATKEDFADEEDYIKAGGSELVFVQMQQNKSMEMQSKLADKLPPISVGDVLDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLGGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVERIVEGSNGHSNVICEYDIVVRCRLATVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENSPYDPNLMVFMDYRDYMKQNVQTLEANYPTFLYAMPMSGTRVFFEETCLASKDAMPFELLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIASILKEGHTSSIITHERSKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFHTFFRLPNWMWQGFLGSSLSSTDLVLFAFYMFIVAPNNLRMCLVRHLLSDPTGTTMVRTYLTI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02554 548 PANTHER - 1 494 - -
Aip03g02554 548 SUPERFAMILY FAD/NAD(P)-binding domain 127 521 IPR036188 -
Aip03g02554 548 Pfam Lycopene cyclase protein 128 525 - -
Aip03g02554 548 PANTHER BNAC09G53690D PROTEIN 1 494 - -
Aip03g02554 548 TIGRFAM carotene-cycl: lycopene cyclase family protein 128 527 IPR010108 GO:0016117|GO:0016705
Aip03g02554 548 Gene3D - 126 491 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02554 Aip-Chr3 44883559 44889557 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02554 K06444 - gmx:100790686 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02554 03 44883559 44889557 Aip03g02554 03 44883559 44889557 ECH