Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02413 ATGATCAAGGGGAAGGACATATACAATGTTATTGCAGGCATTGTGCCCTTGTACGTGGCCATGTTCTTAGGTTATGGCTCAGTTCGGTGGTGGAAGATCTTAACGCCGGAGCAATGCTCCGGTGTCAACCGTTTCGTGTCGATGTTCGCGGCCCCTTTCCTGGCATTTAAGTTCATATCGGCCAACAACCCTTACAAGATGAACTTCAAGTTCTTGGCGGGAGACTCGTTACAAAAGGTTTTCGTTATGGTTGTGCTTTATATATGGAATCTAACGAGATTCGGGAATATGGACACAAGCATAATTATCTATGCCCTTTTTGCTTTGCCTAATACCCTAGTCATGGGGATTCCCTTAATGGAAGCAATGTACGGAAAATTCTCTACACCTCTCATGACTCAAATTGTTGTCTTGCAAAGCGTCATATGGAACACCGTCTTGTTGATTCTGTTCGAGTATAGGGCGGCTAAAATCCTCATCCAAGAGCAATTCCCCGACAACACGGCCGCCATTGCCACAGTGACGATAGATCCGGACGTAGAGTCCCTAGGCGGGGAGTCTCTGCAAGCTGACACGGACGTAGGACACGATGGAAAGCTTCATGTGGTGGTGAGAAGATCAGCATCCGTATCATCTAATAATACATCTTACAAGTCTTTTGAATTGCCTTCCTCAGCCTTATCTAGGGCTTCTTCAAGTGTTAGTGAAATCCATTCTATTTACTCGGCTAGAGAAACCCCGTTAAGATATCCAAGCTTTGAGAGTCCTCATATTATTAATTTGCCAAAAAGCATGTCCGTTGGTACTGTTTTAGAAGAGGATTTCAAGAGGCCAAAGAAATTCTGGGGTGGAAATCGCAAAAATAATAGTAGAGTTTCCTCTATTTGTACCAATGACGACAGTGTTGGATCTTCTAACGTTGTTAATATTGAAGAAAATGTTGAAAACAAAAAGAAACAAATGCCATCTGCGAGGGTCATGACGAAGCTCATTACAGTAATGGCTTATAGGAAGCTCTCATGGAACCCTAATACATGGGCAAGTGTTGTTGGCATCACGTGGTCCCTTATAGCATACAGGTGTCACATCAAAATGCCGTCCATAATTGAAGGTTCCATTACAATAGTGTCAAATACCGGTTTGGGTATGGCTATGTTTAGTCTAGGTCTATTCATGGCATTACAACCAAAGTTCATTGCTTGTGGAAAAAAGTGGGCAGCAATTTCTATGGGTGTTAGGTTCTTGGCTGGTCCGGCACTGATTGCTGCAACCTCAGCACCAATTGGTATCCGTGGAGATCTTTTACGAGTTGAAATTATTCAGGCTGCTCTACCCCAAGGTATCATTCCCTTTATATTTGCTAAAGAATACAATCTTTATCCAGATATCTTCAGTACTGCGGTTATCTTCGGAATGGTGGTTGCATTGCCCGTAACAATAATATACTACGTGCTTCTTGGGCTTTAA 1467 0.4294 MIKGKDIYNVIAGIVPLYVAMFLGYGSVRWWKILTPEQCSGVNRFVSMFAAPFLAFKFISANNPYKMNFKFLAGDSLQKVFVMVVLYIWNLTRFGNMDTSIIIYALFALPNTLVMGIPLMEAMYGKFSTPLMTQIVVLQSVIWNTVLLILFEYRAAKILIQEQFPDNTAAIATVTIDPDVESLGGESLQADTDVGHDGKLHVVVRRSASVSSNNTSYKSFELPSSALSRASSSVSEIHSIYSARETPLRYPSFESPHIINLPKSMSVGTVLEEDFKRPKKFWGGNRKNNSRVSSICTNDDSVGSSNVVNIEENVENKKKQMPSARVMTKLITVMAYRKLSWNPNTWASVVGITWSLIAYRCHIKMPSIIEGSITIVSNTGLGMAMFSLGLFMALQPKFIACGKKWAAISMGVRFLAGPALIAATSAPIGIRGDLLRVEIIQAALPQGIIPFIFAKEYNLYPDIFSTAVIFGMVVALPVTIIYYVLLGL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02413 488 TIGRFAM 2a69: auxin efflux carrier 1 488 IPR014024 -
Aip03g02413 488 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 301 488 - -
Aip03g02413 488 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 266 - -
Aip03g02413 488 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 301 488 IPR033526 GO:0010315|GO:0010329
Aip03g02413 488 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 266 IPR033526 GO:0010315|GO:0010329
Aip03g02413 488 Pfam Membrane transport protein 10 483 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02413 Aip-Chr3 39201327 39204718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02413 231 479 Organic Solute Cotransporters AT1G73590 45.817 5.89e-60 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02413 K13947 - mus:103998154 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02413 03 39201327 39204718 Aip03g02413 03 39201327 39204718 ECH