Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02390 ATGAAGAATGATAATAAGCAGCATGATCAGCACGAGCAAGAACGTCGTTCCCCTGCAGCAGCAGTAGCAGCATATGTGAGGTTGTTTTTGAGTGCACAACAACTCCATCTATTCAACTTGTTTTCCCATCTTCTTCTCTTGGCCTTTGGATTCATCATAGGGATCACACTCGCTTTCTCTCTCAACGGGCAGCAGCTCCTTCTCCCTTCTAATAACAATAATCCTGTTTTTGTCAATAACAATAGTCAAAGCGGGATCAAGAGAGATGGGTTGGGGAGTTTCTTGATGGCAGGAAAGGAGGCAATAATGCATGACATGAGCGACGATGAGTTGTTGTGGAGAGCTTCCATGGTTCCCAAGATTCGGGAAGTGCCACTCAGAATCAAGCCTAAGGTAGCGTTCATGTTCTTGACGAAAGGACCTCTGTATTTGGGTCCACTGTGGGAGAGATTCTTCAAAGGAAACGAAGGCTTCTATTCAATCTACATCCACTCCCATCCTTCTTTCAATGCTTCTTCAGTCCCCAAAACCTCCGTTTTTTATGGCCGCAGAATTCCAAGCAAGGGGGTAAGGTGGGGTGACTTCAACATGGTAGATGCAGAGAGGCGTCTACTAGCAAATGCGCTGCTGGACATGTCGAACCAACGGTTCGTTCTTGTATCGGAGTCATGCATCCCTCTCTTCAACTTCTCAACCGTTTATGGGTATCTTATGAACTCATCCAAGACATTTGTGGAAGCCTACGATCTTGCGGGGCCCGTGGGGAGGGGCAGGTACTCCCAAAGGATGAGGCCACTGATCAAGCCGTCTCAGTGGAGAAAGGGGTCCCAGTGGTTCCAGATAGACCGTGCCCTGGCACTGGAAGTGGTCTCGGACCGCCAGTACTACCCGGTGTTCAAGAAGCACTGCAGGTACGGCGGCTGCATTGCCGACGAGCACTACTTGCCCACTCTTGTTAGCATCAAGTTCTGGAGGAGGAATGCCAACAGGACTTTGACTTGGGTTGATTGGTCAAAGGGCGGGTCCCATCCATCCAGGTACATGAGAAGCGATGTCACTGTTTCGTTCTTGAAGAGACTAAGGCATGCAACCAGATGCCGCTACAATGGCAAGACCACCAATGTTTGCCACTTGTTTGCAAGGAAGTTCATGCCTCACTCTCTCGATAGATTGCTAAGGTTTGCTCCCCGCTTAATGCACTTCCATTCTTCTTGA 1215 0.4897 MKNDNKQHDQHEQERRSPAAAVAAYVRLFLSAQQLHLFNLFSHLLLLAFGFIIGITLAFSLNGQQLLLPSNNNNPVFVNNNSQSGIKRDGLGSFLMAGKEAIMHDMSDDELLWRASMVPKIREVPLRIKPKVAFMFLTKGPLYLGPLWERFFKGNEGFYSIYIHSHPSFNASSVPKTSVFYGRRIPSKGVRWGDFNMVDAERRLLANALLDMSNQRFVLVSESCIPLFNFSTVYGYLMNSSKTFVEAYDLAGPVGRGRYSQRMRPLIKPSQWRKGSQWFQIDRALALEVVSDRQYYPVFKKHCRYGGCIADEHYLPTLVSIKFWRRNANRTLTWVDWSKGGSHPSRYMRSDVTVSFLKRLRHATRCRYNGKTTNVCHLFARKFMPHSLDRLLRFAPRLMHFHSS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02390 404 PANTHER CORE-2/I-BRANCHING ENZYME 24 401 - -
Aip03g02390 404 Pfam Core-2/I-Branching enzyme 132 360 IPR003406 GO:0016020|GO:0016757
Aip03g02390 404 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 24 401 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02390 Aip-Chr3 37985212 37987566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02390 - - gmx:100815747 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02390 03 37985212 37987566 Aip03g02390 03 37985212 37987566 ECH
Aip03g02390 03 37985212 37987566 Aip05g03080 05 133989842 133994420 PCT